RNA–Protein interactions for RNA: ENST00000538715.5

PTPN6-211, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-211ENST00000538715 NISCHQ9Y2I1 1504 aa39.82■■■■□ 3.97
PTPN6-211ENST00000538715 CCDC180Q9P1Z9 1646 aa35.92■■■■□ 3.34
PTPN6-211ENST00000538715 ABCC9O60706 1549 aa35.76■■■■□ 3.31
PTPN6-211ENST00000538715 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
PTPN6-211ENST00000538715 NACADO15069 1562 aa33.96■■■■□ 3.03
PTPN6-211ENST00000538715 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
PTPN6-211ENST00000538715 DNAJC5BQ9UF47 199 aa33.53■■■□□ 2.96
PTPN6-211ENST00000538715 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
PTPN6-211ENST00000538715 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
PTPN6-211ENST00000538715 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
PTPN6-211ENST00000538715 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
PTPN6-211ENST00000538715 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
PTPN6-211ENST00000538715 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
PTPN6-211ENST00000538715 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
PTPN6-211ENST00000538715 SCRIBQ14160 1630 aa32.5■■■□□ 2.79
PTPN6-211ENST00000538715 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
PTPN6-211ENST00000538715 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
PTPN6-211ENST00000538715 CECR2Q9BXF3 1484 aa32.31■■■□□ 2.76
PTPN6-211ENST00000538715 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
PTPN6-211ENST00000538715 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
PTPN6-211ENST00000538715 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
PTPN6-211ENST00000538715 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
PTPN6-211ENST00000538715 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
PTPN6-211ENST00000538715 CUX2O14529 1486 aa31.08■■■□□ 2.57
PTPN6-211ENST00000538715 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
PTPN6-211ENST00000538715 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
PTPN6-211ENST00000538715 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
PTPN6-211ENST00000538715 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
PTPN6-211ENST00000538715 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
PTPN6-211ENST00000538715 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
PTPN6-211ENST00000538715 NESP48681 1621 aa30.65■■■□□ 2.5
PTPN6-211ENST00000538715 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
PTPN6-211ENST00000538715 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
PTPN6-211ENST00000538715 PDS5BQ9NTI5 1447 aa30.45■■■□□ 2.46
PTPN6-211ENST00000538715 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
PTPN6-211ENST00000538715 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
PTPN6-211ENST00000538715 WIZO95785 1651 aa30.22■■■□□ 2.43
PTPN6-211ENST00000538715 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
PTPN6-211ENST00000538715 WDR62O43379 1518 aa30.12■■■□□ 2.41
PTPN6-211ENST00000538715 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
PTPN6-211ENST00000538715 CFTRP13569 1480 aa29.96■■■□□ 2.39
PTPN6-211ENST00000538715 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
PTPN6-211ENST00000538715 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
PTPN6-211ENST00000538715 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
PTPN6-211ENST00000538715 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
PTPN6-211ENST00000538715 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
PTPN6-211ENST00000538715 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
PTPN6-211ENST00000538715 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
PTPN6-211ENST00000538715 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
PTPN6-211ENST00000538715 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
PTPN6-211ENST00000538715 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PTPN6-211ENST00000538715 TOPBP1Q92547 1522 aa29.36■■■□□ 2.29
PTPN6-211ENST00000538715 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
PTPN6-211ENST00000538715 ZNF608Q9ULD9 1512 aaPredicted RBP29.26■■■□□ 2.27
PTPN6-211ENST00000538715 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
PTPN6-211ENST00000538715 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
PTPN6-211ENST00000538715 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
PTPN6-211ENST00000538715 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
PTPN6-211ENST00000538715 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
PTPN6-211ENST00000538715 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
PTPN6-211ENST00000538715 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
PTPN6-211ENST00000538715 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
PTPN6-211ENST00000538715 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.23
PTPN6-211ENST00000538715 CHD1O14646 1710 aa28.97■■■□□ 2.23
PTPN6-211ENST00000538715 SOGA1O94964 1423 aa28.89■■■□□ 2.22
PTPN6-211ENST00000538715 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
PTPN6-211ENST00000538715 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
PTPN6-211ENST00000538715 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
PTPN6-211ENST00000538715 TDRD9Q8NDG6 1382 aaKnown RBP28.77■■■□□ 2.2
PTPN6-211ENST00000538715 FBLN2P98095 1184 aa28.77■■■□□ 2.2
PTPN6-211ENST00000538715 CUX1P39880 1505 aa28.77■■■□□ 2.2
PTPN6-211ENST00000538715 SNAPC4Q5SXM2 1469 aa28.74■■■□□ 2.19
PTPN6-211ENST00000538715 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
PTPN6-211ENST00000538715 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
PTPN6-211ENST00000538715 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
PTPN6-211ENST00000538715 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
PTPN6-211ENST00000538715 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
PTPN6-211ENST00000538715 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
PTPN6-211ENST00000538715 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
PTPN6-211ENST00000538715 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
PTPN6-211ENST00000538715 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
PTPN6-211ENST00000538715 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
PTPN6-211ENST00000538715 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
PTPN6-211ENST00000538715 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.14
PTPN6-211ENST00000538715 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
PTPN6-211ENST00000538715 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
PTPN6-211ENST00000538715 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
PTPN6-211ENST00000538715 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
PTPN6-211ENST00000538715 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
PTPN6-211ENST00000538715 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
PTPN6-211ENST00000538715 NUP160Q12769 1436 aa28.26■■■□□ 2.12
PTPN6-211ENST00000538715 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
PTPN6-211ENST00000538715 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
PTPN6-211ENST00000538715 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
PTPN6-211ENST00000538715 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
PTPN6-211ENST00000538715 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
PTPN6-211ENST00000538715 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
PTPN6-211ENST00000538715 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
PTPN6-211ENST00000538715 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
PTPN6-211ENST00000538715 CUL7Q14999 1698 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms