RNA–Protein interactions for RNA: ENST00000538709.1

IST1-214, Transcript of IST1, ESCRT-III associated factor, humanhuman

TSL 2

Gene IST1, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IST1-214ENST00000538709 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
IST1-214ENST00000538709 ABCC9O60706 1549 aa23.53■■□□□ 1.36
IST1-214ENST00000538709 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
IST1-214ENST00000538709 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
IST1-214ENST00000538709 NACADO15069 1562 aa22.25■■□□□ 1.15
IST1-214ENST00000538709 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
IST1-214ENST00000538709 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
IST1-214ENST00000538709 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
IST1-214ENST00000538709 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
IST1-214ENST00000538709 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
IST1-214ENST00000538709 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
IST1-214ENST00000538709 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
IST1-214ENST00000538709 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
IST1-214ENST00000538709 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
IST1-214ENST00000538709 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
IST1-214ENST00000538709 CC2D2AQ9P2K1 1620 aa21.25■□□□□ 0.99
IST1-214ENST00000538709 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
IST1-214ENST00000538709 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
IST1-214ENST00000538709 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
IST1-214ENST00000538709 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
IST1-214ENST00000538709 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
IST1-214ENST00000538709 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
IST1-214ENST00000538709 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
IST1-214ENST00000538709 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
IST1-214ENST00000538709 CUX2O14529 1486 aa20.33■□□□□ 0.85
IST1-214ENST00000538709 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.84
IST1-214ENST00000538709 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
IST1-214ENST00000538709 PEG3Q9GZU2 1588 aa20.26■□□□□ 0.83
IST1-214ENST00000538709 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
IST1-214ENST00000538709 NESP48681 1621 aa20.21■□□□□ 0.83
IST1-214ENST00000538709 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
IST1-214ENST00000538709 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.8
IST1-214ENST00000538709 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
IST1-214ENST00000538709 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
IST1-214ENST00000538709 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.79
IST1-214ENST00000538709 WIZO95785 1651 aa19.89■□□□□ 0.77
IST1-214ENST00000538709 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
IST1-214ENST00000538709 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
IST1-214ENST00000538709 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
IST1-214ENST00000538709 WDR62O43379 1518 aa19.75■□□□□ 0.75
IST1-214ENST00000538709 CFTRP13569 1480 aa19.71■□□□□ 0.75
IST1-214ENST00000538709 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
IST1-214ENST00000538709 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
IST1-214ENST00000538709 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
IST1-214ENST00000538709 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
IST1-214ENST00000538709 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
IST1-214ENST00000538709 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
IST1-214ENST00000538709 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
IST1-214ENST00000538709 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
IST1-214ENST00000538709 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
IST1-214ENST00000538709 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
IST1-214ENST00000538709 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
IST1-214ENST00000538709 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
IST1-214ENST00000538709 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
IST1-214ENST00000538709 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
IST1-214ENST00000538709 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
IST1-214ENST00000538709 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■■□□□ 12.1
IST1-214ENST00000538709 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
IST1-214ENST00000538709 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
IST1-214ENST00000538709 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
IST1-214ENST00000538709 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
IST1-214ENST00000538709 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
IST1-214ENST00000538709 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
IST1-214ENST00000538709 SOGA1O94964 1423 aa19.03■□□□□ 0.64
IST1-214ENST00000538709 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
IST1-214ENST00000538709 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
IST1-214ENST00000538709 FBLN2P98095 1184 aa18.96■□□□□ 0.63
IST1-214ENST00000538709 CHD1O14646 1710 aa18.96■□□□□ 0.63
IST1-214ENST00000538709 CUX1P39880 1505 aa18.95■□□□□ 0.62
IST1-214ENST00000538709 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
IST1-214ENST00000538709 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
IST1-214ENST00000538709 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
IST1-214ENST00000538709 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
IST1-214ENST00000538709 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
IST1-214ENST00000538709 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
IST1-214ENST00000538709 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
IST1-214ENST00000538709 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
IST1-214ENST00000538709 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
IST1-214ENST00000538709 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
IST1-214ENST00000538709 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
IST1-214ENST00000538709 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
IST1-214ENST00000538709 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
IST1-214ENST00000538709 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
IST1-214ENST00000538709 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
IST1-214ENST00000538709 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
IST1-214ENST00000538709 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
IST1-214ENST00000538709 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
IST1-214ENST00000538709 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
IST1-214ENST00000538709 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
IST1-214ENST00000538709 NUP160Q12769 1436 aa18.59■□□□□ 0.57
IST1-214ENST00000538709 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
IST1-214ENST00000538709 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
IST1-214ENST00000538709 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
IST1-214ENST00000538709 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
IST1-214ENST00000538709 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
IST1-214ENST00000538709 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
IST1-214ENST00000538709 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
IST1-214ENST00000538709 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
IST1-214ENST00000538709 IGF1RP08069 1367 aa18.33■□□□□ 0.53
IST1-214ENST00000538709 RUSC2Q8N2Y8 1516 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms