RNA–Protein interactions for RNA: ENST00000538664.2

PSMA8-204, Transcript of proteasome subunit alpha 8, humanhuman

TSL 1 (best)

Gene PSMA8, Length 1,876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA8-204ENST00000538664 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
PSMA8-204ENST00000538664 CCDC180Q9P1Z9 1646 aa23.87■■□□□ 1.41
PSMA8-204ENST00000538664 ABCC9O60706 1549 aa23.4■■□□□ 1.34
PSMA8-204ENST00000538664 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
PSMA8-204ENST00000538664 NACADO15069 1562 aa22.45■■□□□ 1.18
PSMA8-204ENST00000538664 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
PSMA8-204ENST00000538664 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
PSMA8-204ENST00000538664 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
PSMA8-204ENST00000538664 DCAF1Q9Y4B6 1507 aa22.14■■□□□ 1.13
PSMA8-204ENST00000538664 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
PSMA8-204ENST00000538664 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
PSMA8-204ENST00000538664 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
PSMA8-204ENST00000538664 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
PSMA8-204ENST00000538664 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
PSMA8-204ENST00000538664 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
PSMA8-204ENST00000538664 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
PSMA8-204ENST00000538664 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
PSMA8-204ENST00000538664 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
PSMA8-204ENST00000538664 SMARCA4P51532 1647 aa20.76■□□□□ 0.91
PSMA8-204ENST00000538664 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
PSMA8-204ENST00000538664 NCAPD3P42695 1498 aa20.71■□□□□ 0.91
PSMA8-204ENST00000538664 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
PSMA8-204ENST00000538664 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
PSMA8-204ENST00000538664 HMGXB3Q12766 1538 aa20.62■□□□□ 0.89
PSMA8-204ENST00000538664 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
PSMA8-204ENST00000538664 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
PSMA8-204ENST00000538664 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
PSMA8-204ENST00000538664 WIZO95785 1651 aa20.32■□□□□ 0.84
PSMA8-204ENST00000538664 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
PSMA8-204ENST00000538664 NESP48681 1621 aa20.21■□□□□ 0.83
PSMA8-204ENST00000538664 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
PSMA8-204ENST00000538664 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
PSMA8-204ENST00000538664 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
PSMA8-204ENST00000538664 CUX2O14529 1486 aa20.1■□□□□ 0.81
PSMA8-204ENST00000538664 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
PSMA8-204ENST00000538664 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
PSMA8-204ENST00000538664 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.79
PSMA8-204ENST00000538664 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
PSMA8-204ENST00000538664 CFTRP13569 1480 aa19.94■□□□□ 0.78
PSMA8-204ENST00000538664 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
PSMA8-204ENST00000538664 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
PSMA8-204ENST00000538664 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.77
PSMA8-204ENST00000538664 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.77
PSMA8-204ENST00000538664 WDR62O43379 1518 aa19.82■□□□□ 0.76
PSMA8-204ENST00000538664 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
PSMA8-204ENST00000538664 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
PSMA8-204ENST00000538664 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
PSMA8-204ENST00000538664 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
PSMA8-204ENST00000538664 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
PSMA8-204ENST00000538664 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
PSMA8-204ENST00000538664 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
PSMA8-204ENST00000538664 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
PSMA8-204ENST00000538664 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
PSMA8-204ENST00000538664 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
PSMA8-204ENST00000538664 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
PSMA8-204ENST00000538664 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
PSMA8-204ENST00000538664 CUX1P39880 1505 aa19.3■□□□□ 0.68
PSMA8-204ENST00000538664 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
PSMA8-204ENST00000538664 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
PSMA8-204ENST00000538664 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
PSMA8-204ENST00000538664 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
PSMA8-204ENST00000538664 SOGA1O94964 1423 aa19.21■□□□□ 0.67
PSMA8-204ENST00000538664 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
PSMA8-204ENST00000538664 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
PSMA8-204ENST00000538664 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
PSMA8-204ENST00000538664 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
PSMA8-204ENST00000538664 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
PSMA8-204ENST00000538664 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
PSMA8-204ENST00000538664 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
PSMA8-204ENST00000538664 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
PSMA8-204ENST00000538664 CHD1O14646 1710 aa19.07■□□□□ 0.64
PSMA8-204ENST00000538664 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
PSMA8-204ENST00000538664 GRIN2BQ13224 1484 aa19.04■□□□□ 0.64
PSMA8-204ENST00000538664 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
PSMA8-204ENST00000538664 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
PSMA8-204ENST00000538664 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
PSMA8-204ENST00000538664 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
PSMA8-204ENST00000538664 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
PSMA8-204ENST00000538664 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
PSMA8-204ENST00000538664 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
PSMA8-204ENST00000538664 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
PSMA8-204ENST00000538664 FBLN2P98095 1184 aa18.91■□□□□ 0.62
PSMA8-204ENST00000538664 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
PSMA8-204ENST00000538664 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
PSMA8-204ENST00000538664 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
PSMA8-204ENST00000538664 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
PSMA8-204ENST00000538664 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
PSMA8-204ENST00000538664 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
PSMA8-204ENST00000538664 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
PSMA8-204ENST00000538664 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
PSMA8-204ENST00000538664 NUP160Q12769 1436 aa18.75■□□□□ 0.59
PSMA8-204ENST00000538664 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
PSMA8-204ENST00000538664 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
PSMA8-204ENST00000538664 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
PSMA8-204ENST00000538664 CUL7Q14999 1698 aa18.66■□□□□ 0.58
PSMA8-204ENST00000538664 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
PSMA8-204ENST00000538664 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
PSMA8-204ENST00000538664 IGF1RP08069 1367 aa18.64■□□□□ 0.57
PSMA8-204ENST00000538664 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
PSMA8-204ENST00000538664 ERCC6L2Q5T890 1561 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms