RNA–Protein interactions for RNA: ENST00000538564.5

FOXM1-208, Transcript of forkhead box M1, humanhuman

TSL 3

Gene FOXM1, Length 693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-208ENST00000538564 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
FOXM1-208ENST00000538564 ABCC9O60706 1549 aa17.89■□□□□ 0.45
FOXM1-208ENST00000538564 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
FOXM1-208ENST00000538564 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
FOXM1-208ENST00000538564 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
FOXM1-208ENST00000538564 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
FOXM1-208ENST00000538564 NACADO15069 1562 aa16.84■□□□□ 0.29
FOXM1-208ENST00000538564 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
FOXM1-208ENST00000538564 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
FOXM1-208ENST00000538564 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
FOXM1-208ENST00000538564 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
FOXM1-208ENST00000538564 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
FOXM1-208ENST00000538564 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
FOXM1-208ENST00000538564 SCRIBQ14160 1630 aa16.31■□□□□ 0.2
FOXM1-208ENST00000538564 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
FOXM1-208ENST00000538564 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
FOXM1-208ENST00000538564 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
FOXM1-208ENST00000538564 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
FOXM1-208ENST00000538564 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
FOXM1-208ENST00000538564 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
FOXM1-208ENST00000538564 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
FOXM1-208ENST00000538564 CUX2O14529 1486 aa15.62■□□□□ 0.09
FOXM1-208ENST00000538564 NCAPD3P42695 1498 aa15.56■□□□□ 0.08
FOXM1-208ENST00000538564 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
FOXM1-208ENST00000538564 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
FOXM1-208ENST00000538564 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
FOXM1-208ENST00000538564 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
FOXM1-208ENST00000538564 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
FOXM1-208ENST00000538564 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
FOXM1-208ENST00000538564 HMGXB3Q12766 1538 aa15.46■□□□□ 0.07
FOXM1-208ENST00000538564 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
FOXM1-208ENST00000538564 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
FOXM1-208ENST00000538564 WIZO95785 1651 aa15.35■□□□□ 0.05
FOXM1-208ENST00000538564 TOP2AP11388 1531 aaKnown RBP15.24■□□□□ 0.03
FOXM1-208ENST00000538564 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
FOXM1-208ENST00000538564 NESP48681 1621 aa15.19■□□□□ 0.02
FOXM1-208ENST00000538564 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
FOXM1-208ENST00000538564 LAMC3Q9Y6N6 1575 aa15.1■□□□□ 0.01
FOXM1-208ENST00000538564 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
FOXM1-208ENST00000538564 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
FOXM1-208ENST00000538564 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
FOXM1-208ENST00000538564 CFTRP13569 1480 aa15.03■□□□□ -0
FOXM1-208ENST00000538564 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
FOXM1-208ENST00000538564 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
FOXM1-208ENST00000538564 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
FOXM1-208ENST00000538564 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
FOXM1-208ENST00000538564 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
FOXM1-208ENST00000538564 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
FOXM1-208ENST00000538564 WDR62O43379 1518 aa14.79□□□□□ -0.04
FOXM1-208ENST00000538564 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
FOXM1-208ENST00000538564 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
FOXM1-208ENST00000538564 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
FOXM1-208ENST00000538564 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
FOXM1-208ENST00000538564 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
FOXM1-208ENST00000538564 DNMBPQ6XZF7 1577 aa14.66□□□□□ -0.06
FOXM1-208ENST00000538564 RIMBP3CA6NJZ7 1639 aa14.65□□□□□ -0.06
FOXM1-208ENST00000538564 RIMBP3BA6NNM3 1639 aa14.65□□□□□ -0.06
FOXM1-208ENST00000538564 RIMBP3Q9UFD9 1639 aa14.65□□□□□ -0.06
FOXM1-208ENST00000538564 CYB5RLQ6IPT4 315 aa14.63□□□□□ -0.07
FOXM1-208ENST00000538564 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
FOXM1-208ENST00000538564 CUX1P39880 1505 aa14.59□□□□□ -0.07
FOXM1-208ENST00000538564 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
FOXM1-208ENST00000538564 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
FOXM1-208ENST00000538564 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
FOXM1-208ENST00000538564 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
FOXM1-208ENST00000538564 SOGA1O94964 1423 aa14.52□□□□□ -0.08
FOXM1-208ENST00000538564 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
FOXM1-208ENST00000538564 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
FOXM1-208ENST00000538564 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
FOXM1-208ENST00000538564 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
FOXM1-208ENST00000538564 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
FOXM1-208ENST00000538564 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
FOXM1-208ENST00000538564 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
FOXM1-208ENST00000538564 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.14e-7■■■■■ 32.4
FOXM1-208ENST00000538564 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
FOXM1-208ENST00000538564 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
FOXM1-208ENST00000538564 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
FOXM1-208ENST00000538564 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
FOXM1-208ENST00000538564 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
FOXM1-208ENST00000538564 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
FOXM1-208ENST00000538564 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
FOXM1-208ENST00000538564 FBLN2P98095 1184 aa14.34□□□□□ -0.11
FOXM1-208ENST00000538564 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
FOXM1-208ENST00000538564 MAGI1Q96QZ7 1491 aaPredicted RBP14.3□□□□□ -0.12
FOXM1-208ENST00000538564 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
FOXM1-208ENST00000538564 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
FOXM1-208ENST00000538564 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
FOXM1-208ENST00000538564 ERICH3Q5RHP9 1530 aa14.24□□□□□ -0.13
FOXM1-208ENST00000538564 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
FOXM1-208ENST00000538564 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
FOXM1-208ENST00000538564 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
FOXM1-208ENST00000538564 IGF1RP08069 1367 aa14.19□□□□□ -0.14
FOXM1-208ENST00000538564 CHD1O14646 1710 aa14.18□□□□□ -0.14
FOXM1-208ENST00000538564 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
FOXM1-208ENST00000538564 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
FOXM1-208ENST00000538564 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
FOXM1-208ENST00000538564 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
FOXM1-208ENST00000538564 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
FOXM1-208ENST00000538564 CUL7Q14999 1698 aa14.1□□□□□ -0.15
FOXM1-208ENST00000538564 NUP160Q12769 1436 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms