RNA–Protein interactions for RNA: ENST00000538413.5

LRTOMT-214, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2

Gene LRTOMT, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-214ENST00000538413 NISCHQ9Y2I1 1504 aa35.5■■■■□ 3.27
LRTOMT-214ENST00000538413 ABCC9O60706 1549 aa32.43■■■□□ 2.78
LRTOMT-214ENST00000538413 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
LRTOMT-214ENST00000538413 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
LRTOMT-214ENST00000538413 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
LRTOMT-214ENST00000538413 NACADO15069 1562 aa30.37■■■□□ 2.45
LRTOMT-214ENST00000538413 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
LRTOMT-214ENST00000538413 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
LRTOMT-214ENST00000538413 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
LRTOMT-214ENST00000538413 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
LRTOMT-214ENST00000538413 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
LRTOMT-214ENST00000538413 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
LRTOMT-214ENST00000538413 ZCCHC6Q5VYS8 1495 aaKnown RBP29.33■■■□□ 2.29
LRTOMT-214ENST00000538413 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
LRTOMT-214ENST00000538413 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
LRTOMT-214ENST00000538413 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
LRTOMT-214ENST00000538413 SCRIBQ14160 1630 aa29.14■■■□□ 2.26
LRTOMT-214ENST00000538413 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
LRTOMT-214ENST00000538413 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
LRTOMT-214ENST00000538413 CUX2O14529 1486 aa28.12■■■□□ 2.09
LRTOMT-214ENST00000538413 NCAPD3P42695 1498 aa28.07■■■□□ 2.08
LRTOMT-214ENST00000538413 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
LRTOMT-214ENST00000538413 ATAD2BQ9ULI0 1458 aa27.92■■■□□ 2.06
LRTOMT-214ENST00000538413 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
LRTOMT-214ENST00000538413 HMGXB3Q12766 1538 aa27.79■■■□□ 2.04
LRTOMT-214ENST00000538413 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
LRTOMT-214ENST00000538413 NESP48681 1621 aa27.72■■■□□ 2.03
LRTOMT-214ENST00000538413 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.01
LRTOMT-214ENST00000538413 BAZ1AQ9NRL2 1556 aaPredicted RBP27.59■■■□□ 2.01
LRTOMT-214ENST00000538413 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
LRTOMT-214ENST00000538413 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
LRTOMT-214ENST00000538413 LAMC3Q9Y6N6 1575 aa27.47■■□□□ 1.99
LRTOMT-214ENST00000538413 PDS5BQ9NTI5 1447 aa27.39■■□□□ 1.97
LRTOMT-214ENST00000538413 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
LRTOMT-214ENST00000538413 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
LRTOMT-214ENST00000538413 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
LRTOMT-214ENST00000538413 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
LRTOMT-214ENST00000538413 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
LRTOMT-214ENST00000538413 WDR62O43379 1518 aa27.06■■□□□ 1.92
LRTOMT-214ENST00000538413 WIZO95785 1651 aa26.96■■□□□ 1.91
LRTOMT-214ENST00000538413 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.91
LRTOMT-214ENST00000538413 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
LRTOMT-214ENST00000538413 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
LRTOMT-214ENST00000538413 CFTRP13569 1480 aa26.8■■□□□ 1.88
LRTOMT-214ENST00000538413 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
LRTOMT-214ENST00000538413 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
LRTOMT-214ENST00000538413 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
LRTOMT-214ENST00000538413 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
LRTOMT-214ENST00000538413 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
LRTOMT-214ENST00000538413 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
LRTOMT-214ENST00000538413 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
LRTOMT-214ENST00000538413 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
LRTOMT-214ENST00000538413 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
LRTOMT-214ENST00000538413 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
LRTOMT-214ENST00000538413 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
LRTOMT-214ENST00000538413 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
LRTOMT-214ENST00000538413 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
LRTOMT-214ENST00000538413 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
LRTOMT-214ENST00000538413 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
LRTOMT-214ENST00000538413 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
LRTOMT-214ENST00000538413 AQRO60306 1485 aaKnown RBP eCLIP26.15■■□□□ 1.78
LRTOMT-214ENST00000538413 FBLN2P98095 1184 aa26.11■■□□□ 1.77
LRTOMT-214ENST00000538413 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
LRTOMT-214ENST00000538413 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
LRTOMT-214ENST00000538413 CHD1O14646 1710 aa26.06■■□□□ 1.76
LRTOMT-214ENST00000538413 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
LRTOMT-214ENST00000538413 POLA1P09884 1462 aaPredicted RBP26.03■■□□□ 1.76
LRTOMT-214ENST00000538413 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
LRTOMT-214ENST00000538413 SOGA1O94964 1423 aa25.94■■□□□ 1.74
LRTOMT-214ENST00000538413 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
LRTOMT-214ENST00000538413 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
LRTOMT-214ENST00000538413 CHMP7Q8WUX9 453 aaPredicted RBP25.85■■□□□ 1.73
LRTOMT-214ENST00000538413 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
LRTOMT-214ENST00000538413 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
LRTOMT-214ENST00000538413 CLASP1Q7Z460 1538 aa25.79■■□□□ 1.72
LRTOMT-214ENST00000538413 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
LRTOMT-214ENST00000538413 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
LRTOMT-214ENST00000538413 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
LRTOMT-214ENST00000538413 CUX1P39880 1505 aa25.71■■□□□ 1.71
LRTOMT-214ENST00000538413 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
LRTOMT-214ENST00000538413 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
LRTOMT-214ENST00000538413 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
LRTOMT-214ENST00000538413 PBRM1Q86U86 1689 aa25.53■■□□□ 1.68
LRTOMT-214ENST00000538413 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
LRTOMT-214ENST00000538413 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.67
LRTOMT-214ENST00000538413 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
LRTOMT-214ENST00000538413 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
LRTOMT-214ENST00000538413 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
LRTOMT-214ENST00000538413 NUP160Q12769 1436 aa25.33■■□□□ 1.65
LRTOMT-214ENST00000538413 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
LRTOMT-214ENST00000538413 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
LRTOMT-214ENST00000538413 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
LRTOMT-214ENST00000538413 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
LRTOMT-214ENST00000538413 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
LRTOMT-214ENST00000538413 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
LRTOMT-214ENST00000538413 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
LRTOMT-214ENST00000538413 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
LRTOMT-214ENST00000538413 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
LRTOMT-214ENST00000538413 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
LRTOMT-214ENST00000538413 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms