RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
COPS7A-207ENST00000538375 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
COPS7A-207ENST00000538375 ABCC9O60706 1549 aa27.83■■■□□ 2.05
COPS7A-207ENST00000538375 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
COPS7A-207ENST00000538375 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
COPS7A-207ENST00000538375 NACADO15069 1562 aa26.41■■□□□ 1.82
COPS7A-207ENST00000538375 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
COPS7A-207ENST00000538375 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
COPS7A-207ENST00000538375 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
COPS7A-207ENST00000538375 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
COPS7A-207ENST00000538375 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
COPS7A-207ENST00000538375 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
COPS7A-207ENST00000538375 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
COPS7A-207ENST00000538375 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
COPS7A-207ENST00000538375 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
COPS7A-207ENST00000538375 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
COPS7A-207ENST00000538375 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
COPS7A-207ENST00000538375 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
COPS7A-207ENST00000538375 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
COPS7A-207ENST00000538375 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
COPS7A-207ENST00000538375 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
COPS7A-207ENST00000538375 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
COPS7A-207ENST00000538375 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
COPS7A-207ENST00000538375 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
COPS7A-207ENST00000538375 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
COPS7A-207ENST00000538375 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
COPS7A-207ENST00000538375 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
COPS7A-207ENST00000538375 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
COPS7A-207ENST00000538375 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
COPS7A-207ENST00000538375 WIZO95785 1651 aa24.17■■□□□ 1.46
COPS7A-207ENST00000538375 CUX2O14529 1486 aa24.07■■□□□ 1.44
COPS7A-207ENST00000538375 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
COPS7A-207ENST00000538375 NESP48681 1621 aa23.89■■□□□ 1.42
COPS7A-207ENST00000538375 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
COPS7A-207ENST00000538375 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
COPS7A-207ENST00000538375 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
COPS7A-207ENST00000538375 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
COPS7A-207ENST00000538375 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
COPS7A-207ENST00000538375 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
COPS7A-207ENST00000538375 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
COPS7A-207ENST00000538375 CFTRP13569 1480 aa23.56■■□□□ 1.36
COPS7A-207ENST00000538375 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
COPS7A-207ENST00000538375 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
COPS7A-207ENST00000538375 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
COPS7A-207ENST00000538375 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
COPS7A-207ENST00000538375 WDR62O43379 1518 aa23.32■■□□□ 1.32
COPS7A-207ENST00000538375 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
COPS7A-207ENST00000538375 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
COPS7A-207ENST00000538375 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
COPS7A-207ENST00000538375 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
COPS7A-207ENST00000538375 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
COPS7A-207ENST00000538375 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
COPS7A-207ENST00000538375 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
COPS7A-207ENST00000538375 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
COPS7A-207ENST00000538375 CUX1P39880 1505 aa22.9■■□□□ 1.26
COPS7A-207ENST00000538375 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
COPS7A-207ENST00000538375 SOGA1O94964 1423 aa22.86■■□□□ 1.25
COPS7A-207ENST00000538375 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
COPS7A-207ENST00000538375 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
COPS7A-207ENST00000538375 ZNF608Q9ULD9 1512 aaPredicted RBP22.82■■□□□ 1.24
COPS7A-207ENST00000538375 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
COPS7A-207ENST00000538375 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
COPS7A-207ENST00000538375 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.23
COPS7A-207ENST00000538375 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
COPS7A-207ENST00000538375 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
COPS7A-207ENST00000538375 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
COPS7A-207ENST00000538375 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
COPS7A-207ENST00000538375 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
COPS7A-207ENST00000538375 FBLN2P98095 1184 aa22.61■■□□□ 1.21
COPS7A-207ENST00000538375 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
COPS7A-207ENST00000538375 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
COPS7A-207ENST00000538375 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
COPS7A-207ENST00000538375 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
COPS7A-207ENST00000538375 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
COPS7A-207ENST00000538375 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
COPS7A-207ENST00000538375 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
COPS7A-207ENST00000538375 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
COPS7A-207ENST00000538375 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
COPS7A-207ENST00000538375 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
COPS7A-207ENST00000538375 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
COPS7A-207ENST00000538375 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
COPS7A-207ENST00000538375 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
COPS7A-207ENST00000538375 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
COPS7A-207ENST00000538375 CHD1O14646 1710 aa22.39■■□□□ 1.17
COPS7A-207ENST00000538375 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
COPS7A-207ENST00000538375 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
COPS7A-207ENST00000538375 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
COPS7A-207ENST00000538375 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
COPS7A-207ENST00000538375 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
COPS7A-207ENST00000538375 IGF1RP08069 1367 aa22.25■■□□□ 1.15
COPS7A-207ENST00000538375 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
COPS7A-207ENST00000538375 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
COPS7A-207ENST00000538375 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
COPS7A-207ENST00000538375 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
COPS7A-207ENST00000538375 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
COPS7A-207ENST00000538375 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
COPS7A-207ENST00000538375 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
COPS7A-207ENST00000538375 CUL7Q14999 1698 aa22.1■■□□□ 1.13
COPS7A-207ENST00000538375 NUP160Q12769 1436 aa22.09■■□□□ 1.13
COPS7A-207ENST00000538375 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms