RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
PTPN6-210ENST00000538318 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
PTPN6-210ENST00000538318 ABCC9O60706 1549 aa37.54■■■■□ 3.6
PTPN6-210ENST00000538318 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
PTPN6-210ENST00000538318 NACADO15069 1562 aa35.55■■■■□ 3.28
PTPN6-210ENST00000538318 DCAF8L2P0C7V8 631 aa35.32■■■■□ 3.24
PTPN6-210ENST00000538318 DNAJC5BQ9UF47 199 aa35.21■■■■□ 3.23
PTPN6-210ENST00000538318 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
PTPN6-210ENST00000538318 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
PTPN6-210ENST00000538318 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
PTPN6-210ENST00000538318 ZCCHC6Q5VYS8 1495 aaKnown RBP34.76■■■■□ 3.15
PTPN6-210ENST00000538318 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
PTPN6-210ENST00000538318 DCAF1Q9Y4B6 1507 aa34.66■■■■□ 3.14
PTPN6-210ENST00000538318 SHROOM4Q9ULL8 1493 aa34.29■■■■□ 3.08
PTPN6-210ENST00000538318 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
PTPN6-210ENST00000538318 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
PTPN6-210ENST00000538318 EIF4G1Q04637 1599 aaKnown RBP33.88■■■■□ 3.01
PTPN6-210ENST00000538318 CECR2Q9BXF3 1484 aa33.82■■■■□ 3.01
PTPN6-210ENST00000538318 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
PTPN6-210ENST00000538318 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
PTPN6-210ENST00000538318 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
PTPN6-210ENST00000538318 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
PTPN6-210ENST00000538318 HMGXB3Q12766 1538 aa32.58■■■□□ 2.81
PTPN6-210ENST00000538318 BAZ1AQ9NRL2 1556 aaPredicted RBP32.54■■■□□ 2.8
PTPN6-210ENST00000538318 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
PTPN6-210ENST00000538318 ERCC6Q03468 1493 aa32.4■■■□□ 2.78
PTPN6-210ENST00000538318 BAZ1BQ9UIG0 1483 aaKnown RBP32.39■■■□□ 2.78
PTPN6-210ENST00000538318 CUX2O14529 1486 aa32.36■■■□□ 2.77
PTPN6-210ENST00000538318 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
PTPN6-210ENST00000538318 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
PTPN6-210ENST00000538318 NESP48681 1621 aa32.26■■■□□ 2.76
PTPN6-210ENST00000538318 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
PTPN6-210ENST00000538318 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
PTPN6-210ENST00000538318 WIZO95785 1651 aa31.9■■■□□ 2.7
PTPN6-210ENST00000538318 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
PTPN6-210ENST00000538318 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
PTPN6-210ENST00000538318 CADPSQ9ULU8 1353 aa31.82■■■□□ 2.69
PTPN6-210ENST00000538318 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
PTPN6-210ENST00000538318 MRC2Q9UBG0 1479 aa31.59■■■□□ 2.65
PTPN6-210ENST00000538318 WDR62O43379 1518 aa31.53■■■□□ 2.64
PTPN6-210ENST00000538318 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
PTPN6-210ENST00000538318 CFTRP13569 1480 aa31.47■■■□□ 2.63
PTPN6-210ENST00000538318 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
PTPN6-210ENST00000538318 FANCD2Q9BXW9 1451 aa31.45■■■□□ 2.62
PTPN6-210ENST00000538318 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
PTPN6-210ENST00000538318 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
PTPN6-210ENST00000538318 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
PTPN6-210ENST00000538318 OSCARQ8IYS5 282 aa30.9■■■□□ 2.54
PTPN6-210ENST00000538318 TOPBP1Q92547 1522 aa30.86■■■□□ 2.53
PTPN6-210ENST00000538318 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
PTPN6-210ENST00000538318 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
PTPN6-210ENST00000538318 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
PTPN6-210ENST00000538318 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
PTPN6-210ENST00000538318 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
PTPN6-210ENST00000538318 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
PTPN6-210ENST00000538318 TARBP1Q13395 1621 aaKnown RBP30.59■■■□□ 2.49
PTPN6-210ENST00000538318 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
PTPN6-210ENST00000538318 AQRO60306 1485 aaKnown RBP eCLIP30.52■■■□□ 2.48
PTPN6-210ENST00000538318 RIMBP3CA6NJZ7 1639 aa30.47■■■□□ 2.47
PTPN6-210ENST00000538318 RIMBP3BA6NNM3 1639 aa30.47■■■□□ 2.47
PTPN6-210ENST00000538318 RIMBP3Q9UFD9 1639 aa30.47■■■□□ 2.47
PTPN6-210ENST00000538318 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
PTPN6-210ENST00000538318 SOGA1O94964 1423 aa30.41■■■□□ 2.46
PTPN6-210ENST00000538318 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
PTPN6-210ENST00000538318 CHD1O14646 1710 aa30.38■■■□□ 2.45
PTPN6-210ENST00000538318 FGD5Q6ZNL6 1462 aa30.36■■■□□ 2.45
PTPN6-210ENST00000538318 CUX1P39880 1505 aa30.34■■■□□ 2.45
PTPN6-210ENST00000538318 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
PTPN6-210ENST00000538318 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
PTPN6-210ENST00000538318 FBLN2P98095 1184 aa30.28■■■□□ 2.44
PTPN6-210ENST00000538318 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
PTPN6-210ENST00000538318 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
PTPN6-210ENST00000538318 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
PTPN6-210ENST00000538318 GRIN2BQ13224 1484 aa30.14■■■□□ 2.42
PTPN6-210ENST00000538318 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
PTPN6-210ENST00000538318 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
PTPN6-210ENST00000538318 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
PTPN6-210ENST00000538318 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
PTPN6-210ENST00000538318 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
PTPN6-210ENST00000538318 GAPVD1Q14C86 1478 aa30.04■■■□□ 2.4
PTPN6-210ENST00000538318 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
PTPN6-210ENST00000538318 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
PTPN6-210ENST00000538318 PBRM1Q86U86 1689 aa30.01■■■□□ 2.4
PTPN6-210ENST00000538318 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
PTPN6-210ENST00000538318 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
PTPN6-210ENST00000538318 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
PTPN6-210ENST00000538318 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
PTPN6-210ENST00000538318 TRHP20396 242 aaPredicted RBP29.78■■■□□ 2.36
PTPN6-210ENST00000538318 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
PTPN6-210ENST00000538318 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
PTPN6-210ENST00000538318 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
PTPN6-210ENST00000538318 NUP160Q12769 1436 aa29.67■■■□□ 2.34
PTPN6-210ENST00000538318 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
PTPN6-210ENST00000538318 CEP170Q5SW79 1584 aa29.64■■■□□ 2.33
PTPN6-210ENST00000538318 ERCC6L2Q5T890 1561 aa29.57■■■□□ 2.32
PTPN6-210ENST00000538318 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
PTPN6-210ENST00000538318 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
PTPN6-210ENST00000538318 JPH4Q96JJ6 628 aa29.36■■■□□ 2.29
PTPN6-210ENST00000538318 RUSC2Q8N2Y8 1516 aa29.31■■■□□ 2.28
PTPN6-210ENST00000538318 IGF1RP08069 1367 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms