RNA–Protein interactions for RNA: ENST00000538288.1

CD6-208, Transcript of CD6 molecule, humanhuman

TSL 4

Gene CD6, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD6-208ENST00000538288 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
CD6-208ENST00000538288 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
CD6-208ENST00000538288 ABCC9O60706 1549 aa44.9■■■■■ 4.78
CD6-208ENST00000538288 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
CD6-208ENST00000538288 NACADO15069 1562 aa43.07■■■■■ 4.48
CD6-208ENST00000538288 DCAF8L2P0C7V8 631 aa42.75■■■■■ 4.43
CD6-208ENST00000538288 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
CD6-208ENST00000538288 ZCCHC6Q5VYS8 1495 aaKnown RBP42.55■■■■■ 4.4
CD6-208ENST00000538288 DCAF1Q9Y4B6 1507 aa42.4■■■■■ 4.38
CD6-208ENST00000538288 UNC13AQ9UPW8 1703 aa42.1■■■■■ 4.33
CD6-208ENST00000538288 PABPN1Q86U42 306 aaKnown RBP eCLIP41.82■■■■■ 4.29
CD6-208ENST00000538288 BICRAQ9NZM4 1560 aa41.76■■■■■ 4.28
CD6-208ENST00000538288 SCRIBQ14160 1630 aa41.57■■■■■ 4.25
CD6-208ENST00000538288 SHROOM4Q9ULL8 1493 aa41.54■■■■■ 4.24
CD6-208ENST00000538288 DNAJC5BQ9UF47 199 aa41.36■■■■■ 4.21
CD6-208ENST00000538288 EIF4G1Q04637 1599 aaKnown RBP40.75■■■■■ 4.11
CD6-208ENST00000538288 CC2D2AQ9P2K1 1620 aa40.65■■■■■ 4.1
CD6-208ENST00000538288 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
CD6-208ENST00000538288 SMARCA4P51532 1647 aa39.77■■■■□ 3.96
CD6-208ENST00000538288 BAZ1AQ9NRL2 1556 aaPredicted RBP39.73■■■■□ 3.95
CD6-208ENST00000538288 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
CD6-208ENST00000538288 SMARCA2P51531 1590 aa39.65■■■■□ 3.94
CD6-208ENST00000538288 ATAD2BQ9ULI0 1458 aa39.62■■■■□ 3.93
CD6-208ENST00000538288 HMGXB3Q12766 1538 aa39.51■■■■□ 3.92
CD6-208ENST00000538288 PEG3Q9GZU2 1588 aa39.43■■■■□ 3.9
CD6-208ENST00000538288 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
CD6-208ENST00000538288 BAZ1BQ9UIG0 1483 aaKnown RBP39.32■■■■□ 3.89
CD6-208ENST00000538288 WIZO95785 1651 aa38.9■■■■□ 3.82
CD6-208ENST00000538288 ERCC6Q03468 1493 aa38.84■■■■□ 3.81
CD6-208ENST00000538288 RSF1Q96T23 1441 aaPredicted RBP38.78■■■■□ 3.8
CD6-208ENST00000538288 LAMC3Q9Y6N6 1575 aa38.74■■■■□ 3.79
CD6-208ENST00000538288 NESP48681 1621 aa38.71■■■■□ 3.79
CD6-208ENST00000538288 CUX2O14529 1486 aa38.6■■■■□ 3.77
CD6-208ENST00000538288 TOP2AP11388 1531 aaKnown RBP38.57■■■■□ 3.76
CD6-208ENST00000538288 PDS5BQ9NTI5 1447 aa38.49■■■■□ 3.75
CD6-208ENST00000538288 CADPSQ9ULU8 1353 aa38.49■■■■□ 3.75
CD6-208ENST00000538288 KIF21AQ7Z4S6 1674 aa38.33■■■■□ 3.73
CD6-208ENST00000538288 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
CD6-208ENST00000538288 CFTRP13569 1480 aa38.2■■■■□ 3.71
CD6-208ENST00000538288 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
CD6-208ENST00000538288 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
CD6-208ENST00000538288 FANCD2Q9BXW9 1451 aa38.05■■■■□ 3.68
CD6-208ENST00000538288 CCDC88BA6NC98 1476 aa38.03■■■■□ 3.68
CD6-208ENST00000538288 WDR62O43379 1518 aa37.97■■■■□ 3.67
CD6-208ENST00000538288 PRDM2Q13029 1718 aa37.97■■■■□ 3.67
CD6-208ENST00000538288 DNAJC5Q9H3Z4 198 aa37.68■■■■□ 3.62
CD6-208ENST00000538288 URB2Q14146 1524 aaKnown RBP37.64■■■■□ 3.62
CD6-208ENST00000538288 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
CD6-208ENST00000538288 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
CD6-208ENST00000538288 TOPBP1Q92547 1522 aa37.4■■■■□ 3.58
CD6-208ENST00000538288 DNMBPQ6XZF7 1577 aa37.38■■■■□ 3.57
CD6-208ENST00000538288 IFT140Q96RY7 1462 aa37.31■■■■□ 3.56
CD6-208ENST00000538288 POLA1P09884 1462 aaPredicted RBP37.05■■■■□ 3.52
CD6-208ENST00000538288 ZNF608Q9ULD9 1512 aaPredicted RBP37.04■■■■□ 3.52
CD6-208ENST00000538288 TARBP1Q13395 1621 aaKnown RBP37■■■■□ 3.51
CD6-208ENST00000538288 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
CD6-208ENST00000538288 CUX1P39880 1505 aa36.95■■■■□ 3.51
CD6-208ENST00000538288 FGD5Q6ZNL6 1462 aa36.91■■■■□ 3.5
CD6-208ENST00000538288 SOGA1O94964 1423 aa36.89■■■■□ 3.5
CD6-208ENST00000538288 WDR97A6NE52 1622 aa36.87■■■■□ 3.49
CD6-208ENST00000538288 OSCARQ8IYS5 282 aa36.84■■■■□ 3.49
CD6-208ENST00000538288 RAD54L2Q9Y4B4 1467 aa36.82■■■■□ 3.49
CD6-208ENST00000538288 AQRO60306 1485 aaKnown RBP eCLIP36.78■■■■□ 3.48
CD6-208ENST00000538288 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
CD6-208ENST00000538288 WRNQ14191 1432 aaPredicted RBP eCLIP36.64■■■■□ 3.46
CD6-208ENST00000538288 BIVM-ERCC5R4GMW8 1640 aa36.62■■■■□ 3.45
CD6-208ENST00000538288 TOP2BQ02880 1626 aa36.61■■■■□ 3.45
CD6-208ENST00000538288 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
CD6-208ENST00000538288 GRIN2BQ13224 1484 aa36.56■■■■□ 3.44
CD6-208ENST00000538288 CHD1O14646 1710 aa36.55■■■■□ 3.44
CD6-208ENST00000538288 MAGI1Q96QZ7 1491 aaPredicted RBP36.53■■■■□ 3.44
CD6-208ENST00000538288 SYNJ1O43426 1573 aa36.51■■■■□ 3.44
CD6-208ENST00000538288 SNAPC4Q5SXM2 1469 aa36.5■■■■□ 3.43
CD6-208ENST00000538288 GAPVD1Q14C86 1478 aa36.48■■■■□ 3.43
CD6-208ENST00000538288 ABCA5Q8WWZ7 1642 aa36.46■■■■□ 3.43
CD6-208ENST00000538288 PBRM1Q86U86 1689 aa36.45■■■■□ 3.43
CD6-208ENST00000538288 FBLN2P98095 1184 aa36.43■■■■□ 3.42
CD6-208ENST00000538288 SYNJ2O15056 1496 aa36.36■■■■□ 3.41
CD6-208ENST00000538288 CHMP7Q8WUX9 453 aaPredicted RBP36.33■■■■□ 3.41
CD6-208ENST00000538288 RIMBP3CA6NJZ7 1639 aa36.29■■■■□ 3.4
CD6-208ENST00000538288 RIMBP3BA6NNM3 1639 aa36.29■■■■□ 3.4
CD6-208ENST00000538288 RIMBP3Q9UFD9 1639 aa36.29■■■■□ 3.4
CD6-208ENST00000538288 ARHGEF11O15085 1522 aa36.26■■■■□ 3.4
CD6-208ENST00000538288 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
CD6-208ENST00000538288 ERICH3Q5RHP9 1530 aa36.17■■■■□ 3.38
CD6-208ENST00000538288 CLASP1Q7Z460 1538 aa36.17■■■■□ 3.38
CD6-208ENST00000538288 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
CD6-208ENST00000538288 FHAD1B1AJZ9 1412 aa36.08■■■■□ 3.37
CD6-208ENST00000538288 GRIN2AQ12879 1464 aa36.06■■■■□ 3.36
CD6-208ENST00000538288 KIF27Q86VH2 1401 aa35.94■■■■□ 3.34
CD6-208ENST00000538288 NUP160Q12769 1436 aa35.91■■■■□ 3.34
CD6-208ENST00000538288 ARAP1Q96P48 1450 aa35.91■■■■□ 3.34
CD6-208ENST00000538288 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
CD6-208ENST00000538288 CEP170Q5SW79 1584 aa35.85■■■■□ 3.33
CD6-208ENST00000538288 CUL7Q14999 1698 aa35.81■■■■□ 3.32
CD6-208ENST00000538288 IGF1RP08069 1367 aa35.73■■■■□ 3.31
CD6-208ENST00000538288 SHROOM2Q13796 1616 aa35.7■■■■□ 3.31
CD6-208ENST00000538288 RUSC2Q8N2Y8 1516 aa35.62■■■■□ 3.29
CD6-208ENST00000538288 CARMIL1Q5VZK9 1371 aa35.55■■■■□ 3.28
CD6-208ENST00000538288 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms