RNA–Protein interactions for RNA: ENST00000538236.1

HIP1R-209, Transcript of huntingtin interacting protein 1 related, humanhuman

TSL 3

Gene HIP1R, Length 1,176 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1R-209ENST00000538236 NISCHQ9Y2I1 1504 aa40.2■■■■■ 4.03
HIP1R-209ENST00000538236 ABCC9O60706 1549 aa36.61■■■■□ 3.45
HIP1R-209ENST00000538236 CCDC180Q9P1Z9 1646 aa36.24■■■■□ 3.39
HIP1R-209ENST00000538236 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
HIP1R-209ENST00000538236 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
HIP1R-209ENST00000538236 NACADO15069 1562 aa34.4■■■■□ 3.1
HIP1R-209ENST00000538236 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
HIP1R-209ENST00000538236 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
HIP1R-209ENST00000538236 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
HIP1R-209ENST00000538236 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3
HIP1R-209ENST00000538236 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
HIP1R-209ENST00000538236 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
HIP1R-209ENST00000538236 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
HIP1R-209ENST00000538236 ZCCHC6Q5VYS8 1495 aaKnown RBP33.2■■■□□ 2.91
HIP1R-209ENST00000538236 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
HIP1R-209ENST00000538236 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
HIP1R-209ENST00000538236 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
HIP1R-209ENST00000538236 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
HIP1R-209ENST00000538236 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
HIP1R-209ENST00000538236 CUX2O14529 1486 aa31.79■■■□□ 2.68
HIP1R-209ENST00000538236 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
HIP1R-209ENST00000538236 ERCC6Q03468 1493 aa31.68■■■□□ 2.66
HIP1R-209ENST00000538236 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
HIP1R-209ENST00000538236 SMARCA2P51531 1590 aa31.49■■■□□ 2.63
HIP1R-209ENST00000538236 HMGXB3Q12766 1538 aa31.47■■■□□ 2.63
HIP1R-209ENST00000538236 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
HIP1R-209ENST00000538236 NESP48681 1621 aa31.31■■■□□ 2.6
HIP1R-209ENST00000538236 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
HIP1R-209ENST00000538236 BAZ1AQ9NRL2 1556 aaPredicted RBP31.25■■■□□ 2.59
HIP1R-209ENST00000538236 PEG3Q9GZU2 1588 aa31.16■■■□□ 2.58
HIP1R-209ENST00000538236 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
HIP1R-209ENST00000538236 THOC2Q8NI27 1593 aaKnown RBP31.08■■■□□ 2.57
HIP1R-209ENST00000538236 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
HIP1R-209ENST00000538236 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
HIP1R-209ENST00000538236 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
HIP1R-209ENST00000538236 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
HIP1R-209ENST00000538236 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
HIP1R-209ENST00000538236 TRIM41Q8WV44 630 aa30.61■■■□□ 2.49
HIP1R-209ENST00000538236 WDR62O43379 1518 aa30.61■■■□□ 2.49
HIP1R-209ENST00000538236 WIZO95785 1651 aa30.51■■■□□ 2.47
HIP1R-209ENST00000538236 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
HIP1R-209ENST00000538236 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
HIP1R-209ENST00000538236 CFTRP13569 1480 aa30.34■■■□□ 2.45
HIP1R-209ENST00000538236 OSCARQ8IYS5 282 aa30.32■■■□□ 2.44
HIP1R-209ENST00000538236 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
HIP1R-209ENST00000538236 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
HIP1R-209ENST00000538236 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
HIP1R-209ENST00000538236 PRDM2Q13029 1718 aa29.92■■■□□ 2.38
HIP1R-209ENST00000538236 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
HIP1R-209ENST00000538236 RIMBP3CA6NJZ7 1639 aa29.84■■■□□ 2.37
HIP1R-209ENST00000538236 RIMBP3BA6NNM3 1639 aa29.84■■■□□ 2.37
HIP1R-209ENST00000538236 RIMBP3Q9UFD9 1639 aa29.84■■■□□ 2.37
HIP1R-209ENST00000538236 ZNF608Q9ULD9 1512 aaPredicted RBP29.83■■■□□ 2.37
HIP1R-209ENST00000538236 CCDC88BA6NC98 1476 aa29.82■■■□□ 2.36
HIP1R-209ENST00000538236 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
HIP1R-209ENST00000538236 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
HIP1R-209ENST00000538236 ARHGEF11O15085 1522 aa29.74■■■□□ 2.35
HIP1R-209ENST00000538236 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
HIP1R-209ENST00000538236 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
HIP1R-209ENST00000538236 CYB5RLQ6IPT4 315 aa29.59■■■□□ 2.33
HIP1R-209ENST00000538236 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.324e-7■□□□□ 9.9
HIP1R-209ENST00000538236 TARBP1Q13395 1621 aaKnown RBP29.52■■■□□ 2.32
HIP1R-209ENST00000538236 CHD1O14646 1710 aa29.47■■■□□ 2.31
HIP1R-209ENST00000538236 FBLN2P98095 1184 aa29.46■■■□□ 2.31
HIP1R-209ENST00000538236 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
HIP1R-209ENST00000538236 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
HIP1R-209ENST00000538236 ARAP1Q96P48 1450 aa29.4■■■□□ 2.3
HIP1R-209ENST00000538236 SOGA1O94964 1423 aa29.34■■■□□ 2.29
HIP1R-209ENST00000538236 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
HIP1R-209ENST00000538236 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
HIP1R-209ENST00000538236 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
HIP1R-209ENST00000538236 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
HIP1R-209ENST00000538236 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
HIP1R-209ENST00000538236 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
HIP1R-209ENST00000538236 FGD5Q6ZNL6 1462 aa29.19■■■□□ 2.26
HIP1R-209ENST00000538236 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
HIP1R-209ENST00000538236 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
HIP1R-209ENST00000538236 SYNJ1O43426 1573 aa29.15■■■□□ 2.26
HIP1R-209ENST00000538236 GRIN2BQ13224 1484 aa29.13■■■□□ 2.25
HIP1R-209ENST00000538236 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
HIP1R-209ENST00000538236 CUX1P39880 1505 aa29.08■■■□□ 2.25
HIP1R-209ENST00000538236 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
HIP1R-209ENST00000538236 PBRM1Q86U86 1689 aa28.89■■■□□ 2.22
HIP1R-209ENST00000538236 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
HIP1R-209ENST00000538236 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
HIP1R-209ENST00000538236 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
HIP1R-209ENST00000538236 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
HIP1R-209ENST00000538236 WRNQ14191 1432 aaPredicted RBP eCLIP28.7■■■□□ 2.19
HIP1R-209ENST00000538236 NUP160Q12769 1436 aa28.66■■■□□ 2.18
HIP1R-209ENST00000538236 ERCC6L2Q5T890 1561 aa28.63■■■□□ 2.17
HIP1R-209ENST00000538236 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
HIP1R-209ENST00000538236 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
HIP1R-209ENST00000538236 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
HIP1R-209ENST00000538236 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
HIP1R-209ENST00000538236 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
HIP1R-209ENST00000538236 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
HIP1R-209ENST00000538236 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.15
HIP1R-209ENST00000538236 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
HIP1R-209ENST00000538236 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
HIP1R-209ENST00000538236 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms