RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
PXN-208ENST00000538144 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
PXN-208ENST00000538144 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
PXN-208ENST00000538144 ABCC9O60706 1549 aa28.9■■■□□ 2.22
PXN-208ENST00000538144 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
PXN-208ENST00000538144 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
PXN-208ENST00000538144 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
PXN-208ENST00000538144 NACADO15069 1562 aa28.27■■■□□ 2.12
PXN-208ENST00000538144 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
PXN-208ENST00000538144 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
PXN-208ENST00000538144 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
PXN-208ENST00000538144 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
PXN-208ENST00000538144 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
PXN-208ENST00000538144 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
PXN-208ENST00000538144 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
PXN-208ENST00000538144 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
PXN-208ENST00000538144 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
PXN-208ENST00000538144 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
PXN-208ENST00000538144 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
PXN-208ENST00000538144 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
PXN-208ENST00000538144 WIZO95785 1651 aa26.59■■□□□ 1.85
PXN-208ENST00000538144 EIF4G1Q04637 1599 aaKnown RBP26.46■■□□□ 1.83
PXN-208ENST00000538144 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
PXN-208ENST00000538144 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
PXN-208ENST00000538144 SMARCA2P51531 1590 aa26.26■■□□□ 1.8
PXN-208ENST00000538144 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
PXN-208ENST00000538144 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
PXN-208ENST00000538144 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.77
PXN-208ENST00000538144 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
PXN-208ENST00000538144 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
PXN-208ENST00000538144 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
PXN-208ENST00000538144 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
PXN-208ENST00000538144 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
PXN-208ENST00000538144 CFTRP13569 1480 aa25.46■■□□□ 1.67
PXN-208ENST00000538144 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
PXN-208ENST00000538144 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
PXN-208ENST00000538144 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
PXN-208ENST00000538144 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
PXN-208ENST00000538144 NESP48681 1621 aa25.31■■□□□ 1.64
PXN-208ENST00000538144 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
PXN-208ENST00000538144 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
PXN-208ENST00000538144 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
PXN-208ENST00000538144 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
PXN-208ENST00000538144 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
PXN-208ENST00000538144 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
PXN-208ENST00000538144 CUX1P39880 1505 aa25.05■■□□□ 1.6
PXN-208ENST00000538144 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
PXN-208ENST00000538144 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
PXN-208ENST00000538144 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
PXN-208ENST00000538144 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
PXN-208ENST00000538144 SOGA1O94964 1423 aa24.89■■□□□ 1.58
PXN-208ENST00000538144 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
PXN-208ENST00000538144 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
PXN-208ENST00000538144 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
PXN-208ENST00000538144 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
PXN-208ENST00000538144 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
PXN-208ENST00000538144 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PXN-208ENST00000538144 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
PXN-208ENST00000538144 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
PXN-208ENST00000538144 EEA1Q15075 1411 aa24.73■■□□□ 1.55
PXN-208ENST00000538144 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
PXN-208ENST00000538144 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
PXN-208ENST00000538144 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
PXN-208ENST00000538144 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
PXN-208ENST00000538144 WDR62O43379 1518 aa24.63■■□□□ 1.53
PXN-208ENST00000538144 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
PXN-208ENST00000538144 CUX2O14529 1486 aa24.62■■□□□ 1.53
PXN-208ENST00000538144 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
PXN-208ENST00000538144 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
PXN-208ENST00000538144 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
PXN-208ENST00000538144 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
PXN-208ENST00000538144 KIF21BO75037 1637 aa24.45■■□□□ 1.51
PXN-208ENST00000538144 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PXN-208ENST00000538144 IGF1RP08069 1367 aa24.44■■□□□ 1.5
PXN-208ENST00000538144 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
PXN-208ENST00000538144 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
PXN-208ENST00000538144 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.5
PXN-208ENST00000538144 PRXQ9BXM0 1461 aa24.39■■□□□ 1.5
PXN-208ENST00000538144 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
PXN-208ENST00000538144 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
PXN-208ENST00000538144 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
PXN-208ENST00000538144 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.493e-6■■■□□ 18.5
PXN-208ENST00000538144 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
PXN-208ENST00000538144 ERICH3Q5RHP9 1530 aa24.32■■□□□ 1.48
PXN-208ENST00000538144 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
PXN-208ENST00000538144 TNIKQ9UKE5 1360 aa24.3■■□□□ 1.48
PXN-208ENST00000538144 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
PXN-208ENST00000538144 CUL7Q14999 1698 aa24.26■■□□□ 1.47
PXN-208ENST00000538144 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
PXN-208ENST00000538144 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
PXN-208ENST00000538144 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
PXN-208ENST00000538144 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
PXN-208ENST00000538144 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
PXN-208ENST00000538144 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.45
PXN-208ENST00000538144 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.44
PXN-208ENST00000538144 CLIP1P30622 1438 aa24.03■■□□□ 1.44
PXN-208ENST00000538144 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
PXN-208ENST00000538144 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
PXN-208ENST00000538144 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
PXN-208ENST00000538144 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms