RNA–Protein interactions for RNA: ENST00000538142.5

SSPN-205, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-205ENST00000538142 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
SSPN-205ENST00000538142 ABCC9O60706 1549 aa40.93■■■■■ 4.14
SSPN-205ENST00000538142 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.12
SSPN-205ENST00000538142 RB1CC1Q8TDY2 1594 aa38.92■■■■□ 3.82
SSPN-205ENST00000538142 NACADO15069 1562 aa38.62■■■■□ 3.77
SSPN-205ENST00000538142 DNAJC5BQ9UF47 199 aa38.58■■■■□ 3.77
SSPN-205ENST00000538142 DCAF8L2P0C7V8 631 aa38.33■■■■□ 3.73
SSPN-205ENST00000538142 PABPN1Q86U42 306 aaKnown RBP eCLIP38.07■■■■□ 3.68
SSPN-205ENST00000538142 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.68
SSPN-205ENST00000538142 MYO15BQ96JP2 1530 aa38.06■■■■□ 3.68
SSPN-205ENST00000538142 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
SSPN-205ENST00000538142 ZCCHC6Q5VYS8 1495 aaKnown RBP37.55■■■■□ 3.6
SSPN-205ENST00000538142 DCAF1Q9Y4B6 1507 aa37.49■■■■□ 3.59
SSPN-205ENST00000538142 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
SSPN-205ENST00000538142 SCRIBQ14160 1630 aa37.13■■■■□ 3.53
SSPN-205ENST00000538142 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
SSPN-205ENST00000538142 CECR2Q9BXF3 1484 aa36.91■■■■□ 3.5
SSPN-205ENST00000538142 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
SSPN-205ENST00000538142 NCAPD3P42695 1498 aa35.66■■■■□ 3.3
SSPN-205ENST00000538142 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
SSPN-205ENST00000538142 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.28
SSPN-205ENST00000538142 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
SSPN-205ENST00000538142 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
SSPN-205ENST00000538142 CUX2O14529 1486 aa35.39■■■■□ 3.26
SSPN-205ENST00000538142 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
SSPN-205ENST00000538142 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
SSPN-205ENST00000538142 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
SSPN-205ENST00000538142 BAZ1BQ9UIG0 1483 aaKnown RBP35.15■■■■□ 3.22
SSPN-205ENST00000538142 NESP48681 1621 aa35.12■■■■□ 3.21
SSPN-205ENST00000538142 PEG3Q9GZU2 1588 aa35.12■■■■□ 3.21
SSPN-205ENST00000538142 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
SSPN-205ENST00000538142 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
SSPN-205ENST00000538142 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.16
SSPN-205ENST00000538142 KIF21AQ7Z4S6 1674 aa34.69■■■■□ 3.14
SSPN-205ENST00000538142 PDS5BQ9NTI5 1447 aa34.68■■■■□ 3.14
SSPN-205ENST00000538142 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
SSPN-205ENST00000538142 WIZO95785 1651 aa34.51■■■■□ 3.12
SSPN-205ENST00000538142 MRC2Q9UBG0 1479 aa34.38■■■■□ 3.09
SSPN-205ENST00000538142 WDR62O43379 1518 aa34.31■■■■□ 3.08
SSPN-205ENST00000538142 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
SSPN-205ENST00000538142 RSF1Q96T23 1441 aaPredicted RBP34.15■■■■□ 3.06
SSPN-205ENST00000538142 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
SSPN-205ENST00000538142 CFTRP13569 1480 aa34.13■■■■□ 3.05
SSPN-205ENST00000538142 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.04
SSPN-205ENST00000538142 TRIM41Q8WV44 630 aa33.89■■■■□ 3.02
SSPN-205ENST00000538142 URB2Q14146 1524 aaKnown RBP33.88■■■■□ 3.01
SSPN-205ENST00000538142 PRDM2Q13029 1718 aa33.79■■■■□ 3
SSPN-205ENST00000538142 OSCARQ8IYS5 282 aa33.75■■■□□ 2.99
SSPN-205ENST00000538142 CCDC88BA6NC98 1476 aa33.69■■■□□ 2.98
SSPN-205ENST00000538142 IFT140Q96RY7 1462 aa33.54■■■□□ 2.96
SSPN-205ENST00000538142 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
SSPN-205ENST00000538142 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
SSPN-205ENST00000538142 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
SSPN-205ENST00000538142 DNMBPQ6XZF7 1577 aa33.35■■■□□ 2.93
SSPN-205ENST00000538142 RIMBP3CA6NJZ7 1639 aa33.32■■■□□ 2.92
SSPN-205ENST00000538142 RIMBP3BA6NNM3 1639 aa33.32■■■□□ 2.92
SSPN-205ENST00000538142 RIMBP3Q9UFD9 1639 aa33.32■■■□□ 2.92
SSPN-205ENST00000538142 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
SSPN-205ENST00000538142 TARBP1Q13395 1621 aaKnown RBP33.22■■■□□ 2.91
SSPN-205ENST00000538142 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
SSPN-205ENST00000538142 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.9
SSPN-205ENST00000538142 POLA1P09884 1462 aaPredicted RBP33.12■■■□□ 2.89
SSPN-205ENST00000538142 CHD1O14646 1710 aa33.1■■■□□ 2.89
SSPN-205ENST00000538142 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
SSPN-205ENST00000538142 SOGA1O94964 1423 aa32.98■■■□□ 2.87
SSPN-205ENST00000538142 FBLN2P98095 1184 aa32.96■■■□□ 2.87
SSPN-205ENST00000538142 CYB5RLQ6IPT4 315 aa32.94■■■□□ 2.86
SSPN-205ENST00000538142 TDRD9Q8NDG6 1382 aaKnown RBP32.93■■■□□ 2.86
SSPN-205ENST00000538142 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
SSPN-205ENST00000538142 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
SSPN-205ENST00000538142 ARAP1Q96P48 1450 aa32.84■■■□□ 2.85
SSPN-205ENST00000538142 CUX1P39880 1505 aa32.83■■■□□ 2.85
SSPN-205ENST00000538142 SNAPC4Q5SXM2 1469 aa32.81■■■□□ 2.84
SSPN-205ENST00000538142 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
SSPN-205ENST00000538142 GRIN2BQ13224 1484 aa32.72■■■□□ 2.83
SSPN-205ENST00000538142 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
SSPN-205ENST00000538142 CHMP7Q8WUX9 453 aaPredicted RBP32.71■■■□□ 2.83
SSPN-205ENST00000538142 SYNJ1O43426 1573 aa32.68■■■□□ 2.82
SSPN-205ENST00000538142 SYNJ2O15056 1496 aa32.63■■■□□ 2.81
SSPN-205ENST00000538142 TRHP20396 242 aaPredicted RBP32.62■■■□□ 2.81
SSPN-205ENST00000538142 GAPVD1Q14C86 1478 aa32.58■■■□□ 2.81
SSPN-205ENST00000538142 PBRM1Q86U86 1689 aa32.58■■■□□ 2.81
SSPN-205ENST00000538142 ABCA10Q8WWZ4 1543 aa32.53■■■□□ 2.8
SSPN-205ENST00000538142 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
SSPN-205ENST00000538142 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
SSPN-205ENST00000538142 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
SSPN-205ENST00000538142 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
SSPN-205ENST00000538142 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
SSPN-205ENST00000538142 TOP2BQ02880 1626 aa32.28■■■□□ 2.76
SSPN-205ENST00000538142 ADAMTS12P58397 1594 aa32.25■■■□□ 2.75
SSPN-205ENST00000538142 NUP160Q12769 1436 aa32.2■■■□□ 2.75
SSPN-205ENST00000538142 CEP170Q5SW79 1584 aa32.18■■■□□ 2.74
SSPN-205ENST00000538142 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
SSPN-205ENST00000538142 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
SSPN-205ENST00000538142 ERICH3Q5RHP9 1530 aa32.12■■■□□ 2.73
SSPN-205ENST00000538142 SHROOM2Q13796 1616 aa32.09■■■□□ 2.73
SSPN-205ENST00000538142 PRG4Q92954 1404 aaPredicted RBP31.89■■■□□ 2.7
SSPN-205ENST00000538142 JPH4Q96JJ6 628 aa31.87■■■□□ 2.69
SSPN-205ENST00000538142 AEBP2Q6ZN18 517 aaPredicted RBP31.81■■■□□ 2.68
SSPN-205ENST00000538142 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms