RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
KDM2B-206ENST00000538046 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.58
KDM2B-206ENST00000538046 ABCC9O60706 1549 aa18.18■□□□□ 0.5
KDM2B-206ENST00000538046 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
KDM2B-206ENST00000538046 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
KDM2B-206ENST00000538046 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
KDM2B-206ENST00000538046 NACADO15069 1562 aa17.5■□□□□ 0.39
KDM2B-206ENST00000538046 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
KDM2B-206ENST00000538046 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
KDM2B-206ENST00000538046 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
KDM2B-206ENST00000538046 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
KDM2B-206ENST00000538046 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
KDM2B-206ENST00000538046 BICRAQ9NZM4 1560 aa16.95■□□□□ 0.3
KDM2B-206ENST00000538046 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
KDM2B-206ENST00000538046 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
KDM2B-206ENST00000538046 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
KDM2B-206ENST00000538046 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
KDM2B-206ENST00000538046 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
KDM2B-206ENST00000538046 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
KDM2B-206ENST00000538046 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
KDM2B-206ENST00000538046 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
KDM2B-206ENST00000538046 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
KDM2B-206ENST00000538046 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
KDM2B-206ENST00000538046 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
KDM2B-206ENST00000538046 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
KDM2B-206ENST00000538046 WIZO95785 1651 aa16.13■□□□□ 0.17
KDM2B-206ENST00000538046 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
KDM2B-206ENST00000538046 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
KDM2B-206ENST00000538046 HMGXB3Q12766 1538 aa16.08■□□□□ 0.17
KDM2B-206ENST00000538046 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
KDM2B-206ENST00000538046 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
KDM2B-206ENST00000538046 NESP48681 1621 aa15.77■□□□□ 0.12
KDM2B-206ENST00000538046 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.12
KDM2B-206ENST00000538046 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
KDM2B-206ENST00000538046 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.1
KDM2B-206ENST00000538046 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
KDM2B-206ENST00000538046 CFTRP13569 1480 aa15.65■□□□□ 0.1
KDM2B-206ENST00000538046 CHIC1Q5VXU3 224 aa15.64■□□□□ 0.09
KDM2B-206ENST00000538046 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
KDM2B-206ENST00000538046 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
KDM2B-206ENST00000538046 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
KDM2B-206ENST00000538046 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
KDM2B-206ENST00000538046 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
KDM2B-206ENST00000538046 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
KDM2B-206ENST00000538046 THOC2Q8NI27 1593 aaKnown RBP15.44■□□□□ 0.06
KDM2B-206ENST00000538046 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
KDM2B-206ENST00000538046 HRCP23327 699 aa15.43■□□□□ 0.06
KDM2B-206ENST00000538046 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
KDM2B-206ENST00000538046 WDR62O43379 1518 aa15.37■□□□□ 0.05
KDM2B-206ENST00000538046 CUX2O14529 1486 aa15.36■□□□□ 0.05
KDM2B-206ENST00000538046 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
KDM2B-206ENST00000538046 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
KDM2B-206ENST00000538046 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
KDM2B-206ENST00000538046 CUX1P39880 1505 aa15.26■□□□□ 0.03
KDM2B-206ENST00000538046 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
KDM2B-206ENST00000538046 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
KDM2B-206ENST00000538046 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
KDM2B-206ENST00000538046 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
KDM2B-206ENST00000538046 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
KDM2B-206ENST00000538046 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
KDM2B-206ENST00000538046 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
KDM2B-206ENST00000538046 SOGA1O94964 1423 aa15.16■□□□□ 0.02
KDM2B-206ENST00000538046 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
KDM2B-206ENST00000538046 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
KDM2B-206ENST00000538046 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
KDM2B-206ENST00000538046 MYT1Q01538 1121 aa15.11■□□□□ 0.01
KDM2B-206ENST00000538046 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
KDM2B-206ENST00000538046 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0
KDM2B-206ENST00000538046 TRIM41Q8WV44 630 aa15.08■□□□□ 0
KDM2B-206ENST00000538046 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 0
KDM2B-206ENST00000538046 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
KDM2B-206ENST00000538046 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
KDM2B-206ENST00000538046 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
KDM2B-206ENST00000538046 WDR97A6NE52 1622 aa15.02■□□□□ -0
KDM2B-206ENST00000538046 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
KDM2B-206ENST00000538046 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
KDM2B-206ENST00000538046 GRIN2BQ13224 1484 aa14.94□□□□□ -0.02
KDM2B-206ENST00000538046 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
KDM2B-206ENST00000538046 FBLN2P98095 1184 aa14.93□□□□□ -0.02
KDM2B-206ENST00000538046 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
KDM2B-206ENST00000538046 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
KDM2B-206ENST00000538046 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
KDM2B-206ENST00000538046 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
KDM2B-206ENST00000538046 TRIM26Q12899 539 aaPredicted RBP14.86□□□□□ -0.03
KDM2B-206ENST00000538046 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
KDM2B-206ENST00000538046 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
KDM2B-206ENST00000538046 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
KDM2B-206ENST00000538046 CHD1O14646 1710 aa14.83□□□□□ -0.04
KDM2B-206ENST00000538046 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
KDM2B-206ENST00000538046 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
KDM2B-206ENST00000538046 IGF1RP08069 1367 aa14.82□□□□□ -0.04
KDM2B-206ENST00000538046 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
KDM2B-206ENST00000538046 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
KDM2B-206ENST00000538046 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
KDM2B-206ENST00000538046 CUL7Q14999 1698 aa14.76□□□□□ -0.05
KDM2B-206ENST00000538046 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
KDM2B-206ENST00000538046 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
KDM2B-206ENST00000538046 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
KDM2B-206ENST00000538046 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
KDM2B-206ENST00000538046 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms