RNA–Protein interactions for RNA: ENST00000538045.5

MSRB3-207, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-207ENST00000538045 NISCHQ9Y2I1 1504 aa32.2■■■□□ 2.74
MSRB3-207ENST00000538045 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
MSRB3-207ENST00000538045 ABCC9O60706 1549 aa28.17■■■□□ 2.1
MSRB3-207ENST00000538045 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
MSRB3-207ENST00000538045 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
MSRB3-207ENST00000538045 NACADO15069 1562 aa26.97■■□□□ 1.91
MSRB3-207ENST00000538045 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
MSRB3-207ENST00000538045 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
MSRB3-207ENST00000538045 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
MSRB3-207ENST00000538045 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
MSRB3-207ENST00000538045 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
MSRB3-207ENST00000538045 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
MSRB3-207ENST00000538045 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
MSRB3-207ENST00000538045 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
MSRB3-207ENST00000538045 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
MSRB3-207ENST00000538045 EIF4G1Q04637 1599 aaKnown RBP25.54■■□□□ 1.68
MSRB3-207ENST00000538045 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
MSRB3-207ENST00000538045 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
MSRB3-207ENST00000538045 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
MSRB3-207ENST00000538045 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.58
MSRB3-207ENST00000538045 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
MSRB3-207ENST00000538045 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
MSRB3-207ENST00000538045 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
MSRB3-207ENST00000538045 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
MSRB3-207ENST00000538045 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
MSRB3-207ENST00000538045 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
MSRB3-207ENST00000538045 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
MSRB3-207ENST00000538045 WIZO95785 1651 aa24.57■■□□□ 1.52
MSRB3-207ENST00000538045 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
MSRB3-207ENST00000538045 NESP48681 1621 aa24.35■■□□□ 1.49
MSRB3-207ENST00000538045 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
MSRB3-207ENST00000538045 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
MSRB3-207ENST00000538045 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
MSRB3-207ENST00000538045 CADPSQ9ULU8 1353 aa24.17■■□□□ 1.46
MSRB3-207ENST00000538045 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
MSRB3-207ENST00000538045 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
MSRB3-207ENST00000538045 CUX2O14529 1486 aa24.04■■□□□ 1.44
MSRB3-207ENST00000538045 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
MSRB3-207ENST00000538045 CFTRP13569 1480 aa24■■□□□ 1.43
MSRB3-207ENST00000538045 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
MSRB3-207ENST00000538045 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
MSRB3-207ENST00000538045 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
MSRB3-207ENST00000538045 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
MSRB3-207ENST00000538045 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
MSRB3-207ENST00000538045 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
MSRB3-207ENST00000538045 WDR62O43379 1518 aa23.77■■□□□ 1.4
MSRB3-207ENST00000538045 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
MSRB3-207ENST00000538045 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
MSRB3-207ENST00000538045 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
MSRB3-207ENST00000538045 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
MSRB3-207ENST00000538045 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
MSRB3-207ENST00000538045 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
MSRB3-207ENST00000538045 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
MSRB3-207ENST00000538045 CUX1P39880 1505 aa23.28■■□□□ 1.32
MSRB3-207ENST00000538045 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
MSRB3-207ENST00000538045 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
MSRB3-207ENST00000538045 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
MSRB3-207ENST00000538045 SOGA1O94964 1423 aa23.21■■□□□ 1.31
MSRB3-207ENST00000538045 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
MSRB3-207ENST00000538045 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
MSRB3-207ENST00000538045 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
MSRB3-207ENST00000538045 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
MSRB3-207ENST00000538045 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
MSRB3-207ENST00000538045 OSCARQ8IYS5 282 aa23.09■■□□□ 1.29
MSRB3-207ENST00000538045 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
MSRB3-207ENST00000538045 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
MSRB3-207ENST00000538045 SYNJ1O43426 1573 aa23.05■■□□□ 1.28
MSRB3-207ENST00000538045 WDR97A6NE52 1622 aa23.04■■□□□ 1.28
MSRB3-207ENST00000538045 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
MSRB3-207ENST00000538045 CHD1O14646 1710 aa22.94■■□□□ 1.26
MSRB3-207ENST00000538045 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
MSRB3-207ENST00000538045 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
MSRB3-207ENST00000538045 FBLN2P98095 1184 aa22.93■■□□□ 1.26
MSRB3-207ENST00000538045 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
MSRB3-207ENST00000538045 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
MSRB3-207ENST00000538045 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
MSRB3-207ENST00000538045 MAGI1Q96QZ7 1491 aaPredicted RBP22.87■■□□□ 1.25
MSRB3-207ENST00000538045 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
MSRB3-207ENST00000538045 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MSRB3-207ENST00000538045 ERICH3Q5RHP9 1530 aa22.71■■□□□ 1.23
MSRB3-207ENST00000538045 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
MSRB3-207ENST00000538045 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
MSRB3-207ENST00000538045 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
MSRB3-207ENST00000538045 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
MSRB3-207ENST00000538045 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
MSRB3-207ENST00000538045 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
MSRB3-207ENST00000538045 FHAD1B1AJZ9 1412 aa22.65■■□□□ 1.22
MSRB3-207ENST00000538045 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
MSRB3-207ENST00000538045 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
MSRB3-207ENST00000538045 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
MSRB3-207ENST00000538045 IGF1RP08069 1367 aa22.56■■□□□ 1.2
MSRB3-207ENST00000538045 NUP160Q12769 1436 aa22.53■■□□□ 1.2
MSRB3-207ENST00000538045 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
MSRB3-207ENST00000538045 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
MSRB3-207ENST00000538045 CUL7Q14999 1698 aa22.49■■□□□ 1.19
MSRB3-207ENST00000538045 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
MSRB3-207ENST00000538045 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
MSRB3-207ENST00000538045 RUSC2Q8N2Y8 1516 aa22.42■■□□□ 1.18
MSRB3-207ENST00000538045 SHROOM2Q13796 1616 aa22.39■■□□□ 1.17
MSRB3-207ENST00000538045 JPH4Q96JJ6 628 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms