RNA–Protein interactions for RNA: ENST00000537907.1

TRPT1-206, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 3

Gene TRPT1, Length 602 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-206ENST00000537907 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
TRPT1-206ENST00000537907 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
TRPT1-206ENST00000537907 ABCC9O60706 1549 aa37.34■■■■□ 3.57
TRPT1-206ENST00000537907 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
TRPT1-206ENST00000537907 NACADO15069 1562 aa35.72■■■■□ 3.31
TRPT1-206ENST00000537907 DCAF8L2P0C7V8 631 aa35.58■■■■□ 3.29
TRPT1-206ENST00000537907 ZCCHC6Q5VYS8 1495 aaKnown RBP35.56■■■■□ 3.28
TRPT1-206ENST00000537907 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
TRPT1-206ENST00000537907 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.24
TRPT1-206ENST00000537907 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
TRPT1-206ENST00000537907 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
TRPT1-206ENST00000537907 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
TRPT1-206ENST00000537907 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
TRPT1-206ENST00000537907 DNAJC5BQ9UF47 199 aa34.54■■■■□ 3.12
TRPT1-206ENST00000537907 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
TRPT1-206ENST00000537907 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
TRPT1-206ENST00000537907 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
TRPT1-206ENST00000537907 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
TRPT1-206ENST00000537907 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
TRPT1-206ENST00000537907 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
TRPT1-206ENST00000537907 ATAD2BQ9ULI0 1458 aa33.04■■■□□ 2.88
TRPT1-206ENST00000537907 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
TRPT1-206ENST00000537907 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
TRPT1-206ENST00000537907 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
TRPT1-206ENST00000537907 PEG3Q9GZU2 1588 aa32.85■■■□□ 2.85
TRPT1-206ENST00000537907 HMGXB3Q12766 1538 aa32.83■■■□□ 2.85
TRPT1-206ENST00000537907 BAZ1BQ9UIG0 1483 aaKnown RBP32.69■■■□□ 2.82
TRPT1-206ENST00000537907 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
TRPT1-206ENST00000537907 WIZO95785 1651 aa32.5■■■□□ 2.79
TRPT1-206ENST00000537907 NESP48681 1621 aa32.31■■■□□ 2.76
TRPT1-206ENST00000537907 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
TRPT1-206ENST00000537907 ERCC6Q03468 1493 aa32.11■■■□□ 2.73
TRPT1-206ENST00000537907 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
TRPT1-206ENST00000537907 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
TRPT1-206ENST00000537907 PDS5BQ9NTI5 1447 aa31.9■■■□□ 2.7
TRPT1-206ENST00000537907 CUX2O14529 1486 aa31.89■■■□□ 2.7
TRPT1-206ENST00000537907 CFTRP13569 1480 aa31.85■■■□□ 2.69
TRPT1-206ENST00000537907 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
TRPT1-206ENST00000537907 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
TRPT1-206ENST00000537907 CCDC88BA6NC98 1476 aa31.81■■■□□ 2.68
TRPT1-206ENST00000537907 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
TRPT1-206ENST00000537907 MRC2Q9UBG0 1479 aa31.62■■■□□ 2.65
TRPT1-206ENST00000537907 CEP164Q9UPV0 1460 aa31.6■■■□□ 2.65
TRPT1-206ENST00000537907 WDR62O43379 1518 aa31.55■■■□□ 2.64
TRPT1-206ENST00000537907 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
TRPT1-206ENST00000537907 URB2Q14146 1524 aaKnown RBP31.41■■■□□ 2.62
TRPT1-206ENST00000537907 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
TRPT1-206ENST00000537907 TOPBP1Q92547 1522 aa31.15■■■□□ 2.58
TRPT1-206ENST00000537907 DNAJC5Q9H3Z4 198 aa31.13■■■□□ 2.57
TRPT1-206ENST00000537907 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
TRPT1-206ENST00000537907 ABCC8Q09428 1581 aa31.04■■■□□ 2.56
TRPT1-206ENST00000537907 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
TRPT1-206ENST00000537907 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
TRPT1-206ENST00000537907 POLA1P09884 1462 aaPredicted RBP30.9■■■□□ 2.54
TRPT1-206ENST00000537907 CUX1P39880 1505 aa30.9■■■□□ 2.54
TRPT1-206ENST00000537907 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
TRPT1-206ENST00000537907 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
TRPT1-206ENST00000537907 RAD54L2Q9Y4B4 1467 aa30.77■■■□□ 2.52
TRPT1-206ENST00000537907 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
TRPT1-206ENST00000537907 SOGA1O94964 1423 aa30.72■■■□□ 2.51
TRPT1-206ENST00000537907 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.56e-9■■■■■ 37.6
TRPT1-206ENST00000537907 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
TRPT1-206ENST00000537907 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
TRPT1-206ENST00000537907 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
TRPT1-206ENST00000537907 TOP2BQ02880 1626 aa30.53■■■□□ 2.48
TRPT1-206ENST00000537907 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
TRPT1-206ENST00000537907 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
TRPT1-206ENST00000537907 OSCARQ8IYS5 282 aa30.49■■■□□ 2.47
TRPT1-206ENST00000537907 ABCA10Q8WWZ4 1543 aa30.48■■■□□ 2.47
TRPT1-206ENST00000537907 SNAPC4Q5SXM2 1469 aa30.39■■■□□ 2.46
TRPT1-206ENST00000537907 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
TRPT1-206ENST00000537907 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
TRPT1-206ENST00000537907 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
TRPT1-206ENST00000537907 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
TRPT1-206ENST00000537907 CHD1O14646 1710 aa30.28■■■□□ 2.44
TRPT1-206ENST00000537907 FBLN2P98095 1184 aa30.23■■■□□ 2.43
TRPT1-206ENST00000537907 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
TRPT1-206ENST00000537907 SYNJ2O15056 1496 aa30.21■■■□□ 2.43
TRPT1-206ENST00000537907 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
TRPT1-206ENST00000537907 ADAMTS12P58397 1594 aa30.09■■■□□ 2.41
TRPT1-206ENST00000537907 CLASP1Q7Z460 1538 aa30.09■■■□□ 2.41
TRPT1-206ENST00000537907 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
TRPT1-206ENST00000537907 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
TRPT1-206ENST00000537907 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
TRPT1-206ENST00000537907 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
TRPT1-206ENST00000537907 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
TRPT1-206ENST00000537907 GRIN2AQ12879 1464 aa30.01■■■□□ 2.4
TRPT1-206ENST00000537907 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
TRPT1-206ENST00000537907 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
TRPT1-206ENST00000537907 NUP160Q12769 1436 aa29.93■■■□□ 2.38
TRPT1-206ENST00000537907 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
TRPT1-206ENST00000537907 IGF1RP08069 1367 aa29.91■■■□□ 2.38
TRPT1-206ENST00000537907 CEP170Q5SW79 1584 aa29.89■■■□□ 2.38
TRPT1-206ENST00000537907 ARAP1Q96P48 1450 aa29.87■■■□□ 2.37
TRPT1-206ENST00000537907 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
TRPT1-206ENST00000537907 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
TRPT1-206ENST00000537907 CUL7Q14999 1698 aa29.71■■■□□ 2.35
TRPT1-206ENST00000537907 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
TRPT1-206ENST00000537907 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
TRPT1-206ENST00000537907 CARMIL1Q5VZK9 1371 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 451.2 ms