RNA–Protein interactions for RNA: ENST00000537610.1

PHC1-204, Transcript of polyhomeotic homolog 1, humanhuman

TSL 5

Gene PHC1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-204ENST00000537610 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
PHC1-204ENST00000537610 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
PHC1-204ENST00000537610 ABCC9O60706 1549 aa18.93■□□□□ 0.62
PHC1-204ENST00000537610 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
PHC1-204ENST00000537610 NACADO15069 1562 aa18.03■□□□□ 0.48
PHC1-204ENST00000537610 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
PHC1-204ENST00000537610 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
PHC1-204ENST00000537610 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
PHC1-204ENST00000537610 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
PHC1-204ENST00000537610 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
PHC1-204ENST00000537610 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
PHC1-204ENST00000537610 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
PHC1-204ENST00000537610 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
PHC1-204ENST00000537610 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
PHC1-204ENST00000537610 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
PHC1-204ENST00000537610 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
PHC1-204ENST00000537610 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
PHC1-204ENST00000537610 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
PHC1-204ENST00000537610 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
PHC1-204ENST00000537610 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
PHC1-204ENST00000537610 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
PHC1-204ENST00000537610 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
PHC1-204ENST00000537610 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
PHC1-204ENST00000537610 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
PHC1-204ENST00000537610 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
PHC1-204ENST00000537610 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
PHC1-204ENST00000537610 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
PHC1-204ENST00000537610 NESP48681 1621 aa16.34■□□□□ 0.21
PHC1-204ENST00000537610 WIZO95785 1651 aa16.34■□□□□ 0.21
PHC1-204ENST00000537610 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
PHC1-204ENST00000537610 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
PHC1-204ENST00000537610 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
PHC1-204ENST00000537610 CUX2O14529 1486 aa16.19■□□□□ 0.18
PHC1-204ENST00000537610 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
PHC1-204ENST00000537610 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
PHC1-204ENST00000537610 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
PHC1-204ENST00000537610 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
PHC1-204ENST00000537610 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
PHC1-204ENST00000537610 CFTRP13569 1480 aa16.04■□□□□ 0.16
PHC1-204ENST00000537610 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
PHC1-204ENST00000537610 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
PHC1-204ENST00000537610 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
PHC1-204ENST00000537610 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
PHC1-204ENST00000537610 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
PHC1-204ENST00000537610 WDR62O43379 1518 aa15.93■□□□□ 0.14
PHC1-204ENST00000537610 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
PHC1-204ENST00000537610 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
PHC1-204ENST00000537610 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
PHC1-204ENST00000537610 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
PHC1-204ENST00000537610 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
PHC1-204ENST00000537610 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
PHC1-204ENST00000537610 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
PHC1-204ENST00000537610 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
PHC1-204ENST00000537610 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
PHC1-204ENST00000537610 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
PHC1-204ENST00000537610 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
PHC1-204ENST00000537610 CUX1P39880 1505 aa15.53■□□□□ 0.08
PHC1-204ENST00000537610 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
PHC1-204ENST00000537610 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.07
PHC1-204ENST00000537610 SOGA1O94964 1423 aa15.51■□□□□ 0.07
PHC1-204ENST00000537610 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
PHC1-204ENST00000537610 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
PHC1-204ENST00000537610 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
PHC1-204ENST00000537610 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
PHC1-204ENST00000537610 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
PHC1-204ENST00000537610 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
PHC1-204ENST00000537610 FBLN2P98095 1184 aa15.33■□□□□ 0.04
PHC1-204ENST00000537610 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
PHC1-204ENST00000537610 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.04
PHC1-204ENST00000537610 CHD1O14646 1710 aa15.32■□□□□ 0.04
PHC1-204ENST00000537610 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
PHC1-204ENST00000537610 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
PHC1-204ENST00000537610 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
PHC1-204ENST00000537610 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
PHC1-204ENST00000537610 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
PHC1-204ENST00000537610 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
PHC1-204ENST00000537610 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
PHC1-204ENST00000537610 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
PHC1-204ENST00000537610 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
PHC1-204ENST00000537610 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
PHC1-204ENST00000537610 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
PHC1-204ENST00000537610 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
PHC1-204ENST00000537610 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
PHC1-204ENST00000537610 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
PHC1-204ENST00000537610 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
PHC1-204ENST00000537610 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
PHC1-204ENST00000537610 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
PHC1-204ENST00000537610 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
PHC1-204ENST00000537610 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
PHC1-204ENST00000537610 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
PHC1-204ENST00000537610 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
PHC1-204ENST00000537610 NUP160Q12769 1436 aa15.09■□□□□ 0.01
PHC1-204ENST00000537610 CEP170Q5SW79 1584 aa15.07■□□□□ 0
PHC1-204ENST00000537610 IGF1RP08069 1367 aa15.06■□□□□ 0
PHC1-204ENST00000537610 KIF27Q86VH2 1401 aa15.02■□□□□ -0
PHC1-204ENST00000537610 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
PHC1-204ENST00000537610 SHROOM2Q13796 1616 aa14.97□□□□□ -0.01
PHC1-204ENST00000537610 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
PHC1-204ENST00000537610 CARMIL1Q5VZK9 1371 aa14.93□□□□□ -0.02
PHC1-204ENST00000537610 CUL7Q14999 1698 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms