RNA–Protein interactions for RNA: ENST00000537540.1

SPRYD3-202, Transcript of SPRY domain containing 3, humanhuman

TSL 2

Gene SPRYD3, Length 927 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRYD3-202ENST00000537540 NISCHQ9Y2I1 1504 aa42.75■■■■■ 4.43
SPRYD3-202ENST00000537540 CCDC180Q9P1Z9 1646 aa38.28■■■■□ 3.72
SPRYD3-202ENST00000537540 ABCC9O60706 1549 aa37.97■■■■□ 3.67
SPRYD3-202ENST00000537540 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
SPRYD3-202ENST00000537540 NACADO15069 1562 aa36.07■■■■□ 3.37
SPRYD3-202ENST00000537540 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
SPRYD3-202ENST00000537540 DNAJC5BQ9UF47 199 aa35.75■■■■□ 3.31
SPRYD3-202ENST00000537540 MYO15BQ96JP2 1530 aa35.64■■■■□ 3.3
SPRYD3-202ENST00000537540 UNC13AQ9UPW8 1703 aa35.58■■■■□ 3.29
SPRYD3-202ENST00000537540 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
SPRYD3-202ENST00000537540 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.27
SPRYD3-202ENST00000537540 DCAF1Q9Y4B6 1507 aa35.31■■■■□ 3.24
SPRYD3-202ENST00000537540 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
SPRYD3-202ENST00000537540 SCRIBQ14160 1630 aa34.92■■■■□ 3.18
SPRYD3-202ENST00000537540 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
SPRYD3-202ENST00000537540 CC2D2AQ9P2K1 1620 aa34.34■■■■□ 3.09
SPRYD3-202ENST00000537540 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.09
SPRYD3-202ENST00000537540 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
SPRYD3-202ENST00000537540 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
SPRYD3-202ENST00000537540 NCAPD3P42695 1498 aa33.26■■■□□ 2.92
SPRYD3-202ENST00000537540 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
SPRYD3-202ENST00000537540 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
SPRYD3-202ENST00000537540 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
SPRYD3-202ENST00000537540 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
SPRYD3-202ENST00000537540 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
SPRYD3-202ENST00000537540 PEG3Q9GZU2 1588 aa32.96■■■□□ 2.87
SPRYD3-202ENST00000537540 BAZ1BQ9UIG0 1483 aaKnown RBP32.94■■■□□ 2.86
SPRYD3-202ENST00000537540 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
SPRYD3-202ENST00000537540 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
SPRYD3-202ENST00000537540 NESP48681 1621 aa32.71■■■□□ 2.83
SPRYD3-202ENST00000537540 CUX2O14529 1486 aa32.7■■■□□ 2.83
SPRYD3-202ENST00000537540 WIZO95785 1651 aa32.63■■■□□ 2.81
SPRYD3-202ENST00000537540 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
SPRYD3-202ENST00000537540 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
SPRYD3-202ENST00000537540 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
SPRYD3-202ENST00000537540 THOC2Q8NI27 1593 aaKnown RBP32.35■■■□□ 2.77
SPRYD3-202ENST00000537540 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
SPRYD3-202ENST00000537540 PDS5BQ9NTI5 1447 aa32.27■■■□□ 2.76
SPRYD3-202ENST00000537540 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.74
SPRYD3-202ENST00000537540 MRC2Q9UBG0 1479 aa32.01■■■□□ 2.71
SPRYD3-202ENST00000537540 CFTRP13569 1480 aa31.98■■■□□ 2.71
SPRYD3-202ENST00000537540 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
SPRYD3-202ENST00000537540 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
SPRYD3-202ENST00000537540 WDR62O43379 1518 aa31.94■■■□□ 2.7
SPRYD3-202ENST00000537540 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
SPRYD3-202ENST00000537540 CCDC88BA6NC98 1476 aa31.81■■■□□ 2.68
SPRYD3-202ENST00000537540 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
SPRYD3-202ENST00000537540 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
SPRYD3-202ENST00000537540 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
SPRYD3-202ENST00000537540 OSCARQ8IYS5 282 aa31.33■■■□□ 2.61
SPRYD3-202ENST00000537540 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
SPRYD3-202ENST00000537540 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
SPRYD3-202ENST00000537540 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
SPRYD3-202ENST00000537540 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
SPRYD3-202ENST00000537540 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
SPRYD3-202ENST00000537540 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
SPRYD3-202ENST00000537540 TARBP1Q13395 1621 aaKnown RBP31.1■■■□□ 2.57
SPRYD3-202ENST00000537540 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
SPRYD3-202ENST00000537540 AQRO60306 1485 aaKnown RBP eCLIP30.98■■■□□ 2.55
SPRYD3-202ENST00000537540 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
SPRYD3-202ENST00000537540 CUX1P39880 1505 aa30.96■■■□□ 2.55
SPRYD3-202ENST00000537540 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
SPRYD3-202ENST00000537540 SOGA1O94964 1423 aa30.91■■■□□ 2.54
SPRYD3-202ENST00000537540 CHD1O14646 1710 aa30.88■■■□□ 2.53
SPRYD3-202ENST00000537540 TDRD9Q8NDG6 1382 aaKnown RBP30.81■■■□□ 2.52
SPRYD3-202ENST00000537540 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
SPRYD3-202ENST00000537540 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.52
SPRYD3-202ENST00000537540 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.52
SPRYD3-202ENST00000537540 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.52
SPRYD3-202ENST00000537540 FBLN2P98095 1184 aa30.72■■■□□ 2.51
SPRYD3-202ENST00000537540 ARHGEF11O15085 1522 aa30.7■■■□□ 2.51
SPRYD3-202ENST00000537540 SNAPC4Q5SXM2 1469 aa30.69■■■□□ 2.5
SPRYD3-202ENST00000537540 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
SPRYD3-202ENST00000537540 GRIN2BQ13224 1484 aa30.62■■■□□ 2.49
SPRYD3-202ENST00000537540 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
SPRYD3-202ENST00000537540 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
SPRYD3-202ENST00000537540 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
SPRYD3-202ENST00000537540 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.49
SPRYD3-202ENST00000537540 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
SPRYD3-202ENST00000537540 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
SPRYD3-202ENST00000537540 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
SPRYD3-202ENST00000537540 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
SPRYD3-202ENST00000537540 WRNQ14191 1432 aaPredicted RBP eCLIP30.53■■■□□ 2.48
SPRYD3-202ENST00000537540 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
SPRYD3-202ENST00000537540 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
SPRYD3-202ENST00000537540 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
SPRYD3-202ENST00000537540 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
SPRYD3-202ENST00000537540 ADAMTS12P58397 1594 aa30.3■■■□□ 2.44
SPRYD3-202ENST00000537540 TRHP20396 242 aaPredicted RBP30.26■■■□□ 2.43
SPRYD3-202ENST00000537540 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
SPRYD3-202ENST00000537540 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
SPRYD3-202ENST00000537540 FHAD1B1AJZ9 1412 aa30.16■■■□□ 2.42
SPRYD3-202ENST00000537540 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
SPRYD3-202ENST00000537540 NUP160Q12769 1436 aa30.12■■■□□ 2.41
SPRYD3-202ENST00000537540 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
SPRYD3-202ENST00000537540 SHROOM2Q13796 1616 aa30■■■□□ 2.39
SPRYD3-202ENST00000537540 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
SPRYD3-202ENST00000537540 RUSC2Q8N2Y8 1516 aa29.87■■■□□ 2.37
SPRYD3-202ENST00000537540 CUL7Q14999 1698 aa29.87■■■□□ 2.37
SPRYD3-202ENST00000537540 IGF1RP08069 1367 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms