RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
PMFBP1-206ENST00000537392 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
PMFBP1-206ENST00000537392 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
PMFBP1-206ENST00000537392 ABCC9O60706 1549 aa17.82■□□□□ 0.44
PMFBP1-206ENST00000537392 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
PMFBP1-206ENST00000537392 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
PMFBP1-206ENST00000537392 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
PMFBP1-206ENST00000537392 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
PMFBP1-206ENST00000537392 NACADO15069 1562 aa17.51■□□□□ 0.39
PMFBP1-206ENST00000537392 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
PMFBP1-206ENST00000537392 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
PMFBP1-206ENST00000537392 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
PMFBP1-206ENST00000537392 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
PMFBP1-206ENST00000537392 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
PMFBP1-206ENST00000537392 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
PMFBP1-206ENST00000537392 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
PMFBP1-206ENST00000537392 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
PMFBP1-206ENST00000537392 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
PMFBP1-206ENST00000537392 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
PMFBP1-206ENST00000537392 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
PMFBP1-206ENST00000537392 WIZO95785 1651 aa16.49■□□□□ 0.23
PMFBP1-206ENST00000537392 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
PMFBP1-206ENST00000537392 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
PMFBP1-206ENST00000537392 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.2
PMFBP1-206ENST00000537392 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
PMFBP1-206ENST00000537392 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
PMFBP1-206ENST00000537392 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
PMFBP1-206ENST00000537392 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
PMFBP1-206ENST00000537392 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
PMFBP1-206ENST00000537392 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
PMFBP1-206ENST00000537392 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
PMFBP1-206ENST00000537392 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
PMFBP1-206ENST00000537392 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
PMFBP1-206ENST00000537392 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
PMFBP1-206ENST00000537392 CFTRP13569 1480 aa15.81■□□□□ 0.12
PMFBP1-206ENST00000537392 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
PMFBP1-206ENST00000537392 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
PMFBP1-206ENST00000537392 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
PMFBP1-206ENST00000537392 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
PMFBP1-206ENST00000537392 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
PMFBP1-206ENST00000537392 NESP48681 1621 aa15.64■□□□□ 0.09
PMFBP1-206ENST00000537392 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
PMFBP1-206ENST00000537392 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
PMFBP1-206ENST00000537392 FANCD2Q9BXW9 1451 aa15.58■□□□□ 0.08
PMFBP1-206ENST00000537392 CUX1P39880 1505 aa15.57■□□□□ 0.08
PMFBP1-206ENST00000537392 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
PMFBP1-206ENST00000537392 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
PMFBP1-206ENST00000537392 SOGA1O94964 1423 aa15.51■□□□□ 0.07
PMFBP1-206ENST00000537392 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
PMFBP1-206ENST00000537392 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
PMFBP1-206ENST00000537392 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
PMFBP1-206ENST00000537392 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
PMFBP1-206ENST00000537392 EEA1Q15075 1411 aa15.46■□□□□ 0.07
PMFBP1-206ENST00000537392 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
PMFBP1-206ENST00000537392 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
PMFBP1-206ENST00000537392 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
PMFBP1-206ENST00000537392 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
PMFBP1-206ENST00000537392 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
PMFBP1-206ENST00000537392 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
PMFBP1-206ENST00000537392 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
PMFBP1-206ENST00000537392 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
PMFBP1-206ENST00000537392 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
PMFBP1-206ENST00000537392 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
PMFBP1-206ENST00000537392 CUX2O14529 1486 aa15.29■□□□□ 0.04
PMFBP1-206ENST00000537392 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
PMFBP1-206ENST00000537392 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
PMFBP1-206ENST00000537392 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
PMFBP1-206ENST00000537392 KIF21BO75037 1637 aa15.26■□□□□ 0.03
PMFBP1-206ENST00000537392 GOLGA3Q08378 1498 aa15.24■□□□□ 0.03
PMFBP1-206ENST00000537392 WDR62O43379 1518 aa15.23■□□□□ 0.03
PMFBP1-206ENST00000537392 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
PMFBP1-206ENST00000537392 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
PMFBP1-206ENST00000537392 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
PMFBP1-206ENST00000537392 IGF1RP08069 1367 aa15.2■□□□□ 0.02
PMFBP1-206ENST00000537392 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
PMFBP1-206ENST00000537392 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
PMFBP1-206ENST00000537392 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
PMFBP1-206ENST00000537392 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
PMFBP1-206ENST00000537392 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
PMFBP1-206ENST00000537392 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
PMFBP1-206ENST00000537392 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
PMFBP1-206ENST00000537392 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
PMFBP1-206ENST00000537392 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
PMFBP1-206ENST00000537392 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
PMFBP1-206ENST00000537392 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
PMFBP1-206ENST00000537392 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ 03e-8■■■■■ 38.2
PMFBP1-206ENST00000537392 CUL7Q14999 1698 aa15.05■□□□□ 0
PMFBP1-206ENST00000537392 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ -0
PMFBP1-206ENST00000537392 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
PMFBP1-206ENST00000537392 CLIP1P30622 1438 aa15□□□□□ -0.01
PMFBP1-206ENST00000537392 GRIN2BQ13224 1484 aa15□□□□□ -0.01
PMFBP1-206ENST00000537392 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
PMFBP1-206ENST00000537392 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
PMFBP1-206ENST00000537392 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
PMFBP1-206ENST00000537392 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
PMFBP1-206ENST00000537392 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
PMFBP1-206ENST00000537392 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
PMFBP1-206ENST00000537392 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
PMFBP1-206ENST00000537392 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
PMFBP1-206ENST00000537392 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 226.1 ms