RNA–Protein interactions for RNA: ENST00000537252.1

PRPH-206, Transcript of peripherin, humanhuman

TSL 3

Gene PRPH, Length 630 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH-206ENST00000537252 NISCHQ9Y2I1 1504 aa54.57■■■■■ 6.33
PRPH-206ENST00000537252 CCDC180Q9P1Z9 1646 aa48.59■■■■■ 5.37
PRPH-206ENST00000537252 ABCC9O60706 1549 aa48.29■■■■■ 5.32
PRPH-206ENST00000537252 RB1CC1Q8TDY2 1594 aa46.09■■■■■ 4.97
PRPH-206ENST00000537252 DCAF8L2P0C7V8 631 aa46.06■■■■■ 4.96
PRPH-206ENST00000537252 NACADO15069 1562 aa45.9■■■■■ 4.94
PRPH-206ENST00000537252 MYO15BQ96JP2 1530 aa45.41■■■■■ 4.86
PRPH-206ENST00000537252 ZCCHC6Q5VYS8 1495 aaKnown RBP45.31■■■■■ 4.84
PRPH-206ENST00000537252 PABPN1Q86U42 306 aaKnown RBP eCLIP45.15■■■■■ 4.82
PRPH-206ENST00000537252 DCAF1Q9Y4B6 1507 aa45.04■■■■■ 4.8
PRPH-206ENST00000537252 UNC13AQ9UPW8 1703 aa44.93■■■■■ 4.78
PRPH-206ENST00000537252 DNAJC5BQ9UF47 199 aa44.89■■■■■ 4.78
PRPH-206ENST00000537252 BICRAQ9NZM4 1560 aa44.73■■■■■ 4.75
PRPH-206ENST00000537252 SCRIBQ14160 1630 aa44.46■■■■■ 4.71
PRPH-206ENST00000537252 SHROOM4Q9ULL8 1493 aa44.12■■■■■ 4.65
PRPH-206ENST00000537252 EIF4G1Q04637 1599 aaKnown RBP43.6■■■■■ 4.57
PRPH-206ENST00000537252 CC2D2AQ9P2K1 1620 aa43.56■■■■■ 4.56
PRPH-206ENST00000537252 CECR2Q9BXF3 1484 aa43.42■■■■■ 4.54
PRPH-206ENST00000537252 NCAPD3P42695 1498 aa42.42■■■■■ 4.38
PRPH-206ENST00000537252 SMARCA4P51532 1647 aa42.41■■■■■ 4.38
PRPH-206ENST00000537252 ATAD2BQ9ULI0 1458 aa42.38■■■■■ 4.38
PRPH-206ENST00000537252 BAZ1AQ9NRL2 1556 aaPredicted RBP42.29■■■■■ 4.36
PRPH-206ENST00000537252 SMARCA2P51531 1590 aa42.24■■■■■ 4.35
PRPH-206ENST00000537252 HMGXB3Q12766 1538 aa42.09■■■■■ 4.33
PRPH-206ENST00000537252 MROH2BQ7Z745 1585 aa42.09■■■■■ 4.33
PRPH-206ENST00000537252 BAZ1BQ9UIG0 1483 aaKnown RBP42■■■■■ 4.31
PRPH-206ENST00000537252 PEG3Q9GZU2 1588 aa41.96■■■■■ 4.31
PRPH-206ENST00000537252 ERCC6Q03468 1493 aa41.66■■■■■ 4.26
PRPH-206ENST00000537252 NESP48681 1621 aa41.62■■■■■ 4.25
PRPH-206ENST00000537252 WIZO95785 1651 aa41.56■■■■■ 4.24
PRPH-206ENST00000537252 RSF1Q96T23 1441 aaPredicted RBP41.44■■■■■ 4.22
PRPH-206ENST00000537252 CUX2O14529 1486 aa41.31■■■■■ 4.2
PRPH-206ENST00000537252 LAMC3Q9Y6N6 1575 aa41.31■■■■■ 4.2
PRPH-206ENST00000537252 CADPSQ9ULU8 1353 aa41.2■■■■■ 4.19
PRPH-206ENST00000537252 PDS5BQ9NTI5 1447 aa41.15■■■■■ 4.18
PRPH-206ENST00000537252 TOP2AP11388 1531 aaKnown RBP41.07■■■■■ 4.16
PRPH-206ENST00000537252 THOC2Q8NI27 1593 aaKnown RBP40.98■■■■■ 4.15
PRPH-206ENST00000537252 KIF21AQ7Z4S6 1674 aa40.98■■■■■ 4.15
PRPH-206ENST00000537252 CFTRP13569 1480 aa40.81■■■■■ 4.12
PRPH-206ENST00000537252 DNAJC5Q9H3Z4 198 aa40.78■■■■■ 4.12
PRPH-206ENST00000537252 MRC2Q9UBG0 1479 aa40.74■■■■■ 4.11
PRPH-206ENST00000537252 FANCD2Q9BXW9 1451 aa40.71■■■■■ 4.11
PRPH-206ENST00000537252 CEP164Q9UPV0 1460 aa40.69■■■■■ 4.1
PRPH-206ENST00000537252 CCDC88BA6NC98 1476 aa40.68■■■■■ 4.1
PRPH-206ENST00000537252 WDR62O43379 1518 aa40.57■■■■■ 4.09
PRPH-206ENST00000537252 URB2Q14146 1524 aaKnown RBP40.34■■■■■ 4.05
PRPH-206ENST00000537252 PRDM2Q13029 1718 aa40.23■■■■■ 4.03
PRPH-206ENST00000537252 SUPT5HO00267 1087 aaKnown RBP40.15■■■■■ 4.02
PRPH-206ENST00000537252 TOPBP1Q92547 1522 aa39.98■■■■□ 3.99
PRPH-206ENST00000537252 ABCC8Q09428 1581 aa39.9■■■■□ 3.98
PRPH-206ENST00000537252 IFT140Q96RY7 1462 aa39.86■■■■□ 3.97
PRPH-206ENST00000537252 DNMBPQ6XZF7 1577 aa39.84■■■■□ 3.97
PRPH-206ENST00000537252 ZNF608Q9ULD9 1512 aaPredicted RBP39.78■■■■□ 3.96
PRPH-206ENST00000537252 OSCARQ8IYS5 282 aa39.64■■■■□ 3.94
PRPH-206ENST00000537252 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
PRPH-206ENST00000537252 TARBP1Q13395 1621 aaKnown RBP39.54■■■■□ 3.92
PRPH-206ENST00000537252 AQRO60306 1485 aaKnown RBP eCLIP39.52■■■■□ 3.92
PRPH-206ENST00000537252 RAD54L2Q9Y4B4 1467 aa39.52■■■■□ 3.92
PRPH-206ENST00000537252 CUX1P39880 1505 aa39.5■■■■□ 3.91
PRPH-206ENST00000537252 SOGA1O94964 1423 aa39.5■■■■□ 3.91
PRPH-206ENST00000537252 EIF4G3O43432 1585 aaKnown RBP39.5■■■■□ 3.91
PRPH-206ENST00000537252 FGD5Q6ZNL6 1462 aa39.45■■■■□ 3.91
PRPH-206ENST00000537252 TDRD9Q8NDG6 1382 aaKnown RBP39.39■■■■□ 3.9
PRPH-206ENST00000537252 TRIM41Q8WV44 630 aa39.31■■■■□ 3.88
PRPH-206ENST00000537252 FBLN2P98095 1184 aa39.24■■■■□ 3.87
PRPH-206ENST00000537252 WDR97A6NE52 1622 aa39.11■■■■□ 3.85
PRPH-206ENST00000537252 SNAPC4Q5SXM2 1469 aa39.09■■■■□ 3.85
PRPH-206ENST00000537252 WRNQ14191 1432 aaPredicted RBP eCLIP39.07■■■■□ 3.85
PRPH-206ENST00000537252 CHD1O14646 1710 aa39.06■■■■□ 3.84
PRPH-206ENST00000537252 GRIN2BQ13224 1484 aa39.05■■■■□ 3.84
PRPH-206ENST00000537252 ABCA10Q8WWZ4 1543 aa39.01■■■■□ 3.84
PRPH-206ENST00000537252 GAPVD1Q14C86 1478 aa39■■■■□ 3.83
PRPH-206ENST00000537252 CHMP7Q8WUX9 453 aaPredicted RBP38.99■■■■□ 3.83
PRPH-206ENST00000537252 MAGI1Q96QZ7 1491 aaPredicted RBP38.97■■■■□ 3.83
PRPH-206ENST00000537252 SYNJ1O43426 1573 aa38.96■■■■□ 3.83
PRPH-206ENST00000537252 TOP2BQ02880 1626 aa38.96■■■■□ 3.83
PRPH-206ENST00000537252 RIMBP3CA6NJZ7 1639 aa38.93■■■■□ 3.82
PRPH-206ENST00000537252 RIMBP3BA6NNM3 1639 aa38.93■■■■□ 3.82
PRPH-206ENST00000537252 RIMBP3Q9UFD9 1639 aa38.93■■■■□ 3.82
PRPH-206ENST00000537252 BIVM-ERCC5R4GMW8 1640 aa38.92■■■■□ 3.82
PRPH-206ENST00000537252 ARHGEF11O15085 1522 aa38.9■■■■□ 3.82
PRPH-206ENST00000537252 ABCA5Q8WWZ7 1642 aa38.85■■■■□ 3.81
PRPH-206ENST00000537252 SYNJ2O15056 1496 aa38.85■■■■□ 3.81
PRPH-206ENST00000537252 PBRM1Q86U86 1689 aa38.81■■■■□ 3.8
PRPH-206ENST00000537252 CYB5RLQ6IPT4 315 aa38.72■■■■□ 3.79
PRPH-206ENST00000537252 CLASP1Q7Z460 1538 aa38.67■■■■□ 3.78
PRPH-206ENST00000537252 ARAP1Q96P48 1450 aa38.57■■■■□ 3.76
PRPH-206ENST00000537252 GRIN2AQ12879 1464 aa38.54■■■■□ 3.76
PRPH-206ENST00000537252 ADAMTS12P58397 1594 aa38.53■■■■□ 3.76
PRPH-206ENST00000537252 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
PRPH-206ENST00000537252 ERICH3Q5RHP9 1530 aa38.51■■■■□ 3.76
PRPH-206ENST00000537252 NUP160Q12769 1436 aa38.38■■■■□ 3.74
PRPH-206ENST00000537252 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
PRPH-206ENST00000537252 KIF27Q86VH2 1401 aa38.3■■■■□ 3.72
PRPH-206ENST00000537252 IGF1RP08069 1367 aa38.26■■■■□ 3.72
PRPH-206ENST00000537252 ERCC6L2Q5T890 1561 aa38.17■■■■□ 3.7
PRPH-206ENST00000537252 TRHP20396 242 aaPredicted RBP38.13■■■■□ 3.69
PRPH-206ENST00000537252 JPH4Q96JJ6 628 aa38.09■■■■□ 3.69
PRPH-206ENST00000537252 SHROOM2Q13796 1616 aa38.07■■■■□ 3.68
PRPH-206ENST00000537252 PRG4Q92954 1404 aaPredicted RBP38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms