RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
LPCAT3-206ENST00000537179 ABCC9O60706 1549 aa36.94■■■■□ 3.5
LPCAT3-206ENST00000537179 CCDC180Q9P1Z9 1646 aa36.11■■■■□ 3.37
LPCAT3-206ENST00000537179 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
LPCAT3-206ENST00000537179 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
LPCAT3-206ENST00000537179 NACADO15069 1562 aa34.27■■■■□ 3.08
LPCAT3-206ENST00000537179 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
LPCAT3-206ENST00000537179 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
LPCAT3-206ENST00000537179 BICRAQ9NZM4 1560 aa33.84■■■■□ 3.01
LPCAT3-206ENST00000537179 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
LPCAT3-206ENST00000537179 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
LPCAT3-206ENST00000537179 CC2D2AQ9P2K1 1620 aa33.39■■■□□ 2.93
LPCAT3-206ENST00000537179 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
LPCAT3-206ENST00000537179 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
LPCAT3-206ENST00000537179 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
LPCAT3-206ENST00000537179 EIF4G1Q04637 1599 aaKnown RBP33.06■■■□□ 2.88
LPCAT3-206ENST00000537179 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
LPCAT3-206ENST00000537179 DCAF1Q9Y4B6 1507 aa32.68■■■□□ 2.82
LPCAT3-206ENST00000537179 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
LPCAT3-206ENST00000537179 CUX2O14529 1486 aa32.24■■■□□ 2.75
LPCAT3-206ENST00000537179 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
LPCAT3-206ENST00000537179 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
LPCAT3-206ENST00000537179 NESP48681 1621 aa31.48■■■□□ 2.63
LPCAT3-206ENST00000537179 THOC2Q8NI27 1593 aaKnown RBP31.45■■■□□ 2.63
LPCAT3-206ENST00000537179 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
LPCAT3-206ENST00000537179 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
LPCAT3-206ENST00000537179 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
LPCAT3-206ENST00000537179 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
LPCAT3-206ENST00000537179 SMARCA4P51532 1647 aa31.19■■■□□ 2.58
LPCAT3-206ENST00000537179 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
LPCAT3-206ENST00000537179 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
LPCAT3-206ENST00000537179 BAZ1BQ9UIG0 1483 aaKnown RBP31.03■■■□□ 2.56
LPCAT3-206ENST00000537179 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
LPCAT3-206ENST00000537179 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
LPCAT3-206ENST00000537179 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
LPCAT3-206ENST00000537179 WDR62O43379 1518 aa30.73■■■□□ 2.51
LPCAT3-206ENST00000537179 MRC2Q9UBG0 1479 aa30.73■■■□□ 2.51
LPCAT3-206ENST00000537179 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
LPCAT3-206ENST00000537179 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
LPCAT3-206ENST00000537179 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
LPCAT3-206ENST00000537179 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
LPCAT3-206ENST00000537179 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
LPCAT3-206ENST00000537179 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
LPCAT3-206ENST00000537179 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
LPCAT3-206ENST00000537179 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
LPCAT3-206ENST00000537179 WIZO95785 1651 aa30.17■■■□□ 2.42
LPCAT3-206ENST00000537179 ARHGEF11O15085 1522 aa30.16■■■□□ 2.42
LPCAT3-206ENST00000537179 URB2Q14146 1524 aaKnown RBP30.12■■■□□ 2.41
LPCAT3-206ENST00000537179 CFTRP13569 1480 aa30.05■■■□□ 2.4
LPCAT3-206ENST00000537179 ZNF608Q9ULD9 1512 aaPredicted RBP29.9■■■□□ 2.38
LPCAT3-206ENST00000537179 PRDM2Q13029 1718 aa29.89■■■□□ 2.38
LPCAT3-206ENST00000537179 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
LPCAT3-206ENST00000537179 TRHP20396 242 aaPredicted RBP29.81■■■□□ 2.36
LPCAT3-206ENST00000537179 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
LPCAT3-206ENST00000537179 ARAP1Q96P48 1450 aa29.79■■■□□ 2.36
LPCAT3-206ENST00000537179 CHD1O14646 1710 aa29.78■■■□□ 2.36
LPCAT3-206ENST00000537179 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
LPCAT3-206ENST00000537179 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
LPCAT3-206ENST00000537179 AEBP2Q6ZN18 517 aaPredicted RBP29.66■■■□□ 2.34
LPCAT3-206ENST00000537179 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
LPCAT3-206ENST00000537179 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
LPCAT3-206ENST00000537179 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
LPCAT3-206ENST00000537179 AQRO60306 1485 aaKnown RBP eCLIP29.45■■■□□ 2.31
LPCAT3-206ENST00000537179 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
LPCAT3-206ENST00000537179 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
LPCAT3-206ENST00000537179 FBLN2P98095 1184 aa29.36■■■□□ 2.29
LPCAT3-206ENST00000537179 CLASP1Q7Z460 1538 aa29.34■■■□□ 2.29
LPCAT3-206ENST00000537179 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
LPCAT3-206ENST00000537179 POLA1P09884 1462 aaPredicted RBP29.24■■■□□ 2.27
LPCAT3-206ENST00000537179 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
LPCAT3-206ENST00000537179 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
LPCAT3-206ENST00000537179 RAD54L2Q9Y4B4 1467 aa29.13■■■□□ 2.25
LPCAT3-206ENST00000537179 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
LPCAT3-206ENST00000537179 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
LPCAT3-206ENST00000537179 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
LPCAT3-206ENST00000537179 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
LPCAT3-206ENST00000537179 SOGA1O94964 1423 aa29.01■■■□□ 2.23
LPCAT3-206ENST00000537179 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
LPCAT3-206ENST00000537179 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
LPCAT3-206ENST00000537179 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
LPCAT3-206ENST00000537179 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
LPCAT3-206ENST00000537179 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
LPCAT3-206ENST00000537179 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
LPCAT3-206ENST00000537179 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
LPCAT3-206ENST00000537179 CUX1P39880 1505 aa28.76■■■□□ 2.19
LPCAT3-206ENST00000537179 ABCA5Q8WWZ7 1642 aa28.67■■■□□ 2.18
LPCAT3-206ENST00000537179 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
LPCAT3-206ENST00000537179 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
LPCAT3-206ENST00000537179 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
LPCAT3-206ENST00000537179 ILDR1Q86SU0 546 aaPredicted RBP28.56■■■□□ 2.16
LPCAT3-206ENST00000537179 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
LPCAT3-206ENST00000537179 ADAMTS12P58397 1594 aa28.51■■■□□ 2.15
LPCAT3-206ENST00000537179 NUP160Q12769 1436 aa28.51■■■□□ 2.15
LPCAT3-206ENST00000537179 KDM4FA0A1W2PPD8 638 aa28.4■■■□□ 2.14
LPCAT3-206ENST00000537179 ABCC10Q5T3U5 1492 aa28.38■■■□□ 2.13
LPCAT3-206ENST00000537179 DIP2BQ9P265 1576 aa28.37■■■□□ 2.13
LPCAT3-206ENST00000537179 KDM6BO15054 1643 aa28.37■■■□□ 2.13
LPCAT3-206ENST00000537179 MAPKBP1O60336 1514 aa28.31■■■□□ 2.12
LPCAT3-206ENST00000537179 FAM69CQ0P6D2 419 aa28.3■■■□□ 2.12
LPCAT3-206ENST00000537179 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms