RNA–Protein interactions for RNA: ENST00000537136.1

DDX11-210, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 4

Gene DDX11, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-210ENST00000537136 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
DDX11-210ENST00000537136 ABCC9O60706 1549 aa29■■■□□ 2.23
DDX11-210ENST00000537136 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
DDX11-210ENST00000537136 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
DDX11-210ENST00000537136 DCAF8L2P0C7V8 631 aa27.52■■■□□ 2
DDX11-210ENST00000537136 NACADO15069 1562 aa27.46■■□□□ 1.99
DDX11-210ENST00000537136 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
DDX11-210ENST00000537136 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
DDX11-210ENST00000537136 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
DDX11-210ENST00000537136 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
DDX11-210ENST00000537136 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
DDX11-210ENST00000537136 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
DDX11-210ENST00000537136 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
DDX11-210ENST00000537136 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
DDX11-210ENST00000537136 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
DDX11-210ENST00000537136 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
DDX11-210ENST00000537136 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
DDX11-210ENST00000537136 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
DDX11-210ENST00000537136 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
DDX11-210ENST00000537136 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
DDX11-210ENST00000537136 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
DDX11-210ENST00000537136 SMARCA4P51532 1647 aa25.2■■□□□ 1.62
DDX11-210ENST00000537136 BAZ1AQ9NRL2 1556 aaPredicted RBP25.15■■□□□ 1.62
DDX11-210ENST00000537136 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
DDX11-210ENST00000537136 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
DDX11-210ENST00000537136 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
DDX11-210ENST00000537136 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
DDX11-210ENST00000537136 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
DDX11-210ENST00000537136 CUX2O14529 1486 aa24.97■■□□□ 1.59
DDX11-210ENST00000537136 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
DDX11-210ENST00000537136 NESP48681 1621 aa24.9■■□□□ 1.58
DDX11-210ENST00000537136 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
DDX11-210ENST00000537136 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
DDX11-210ENST00000537136 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
DDX11-210ENST00000537136 WIZO95785 1651 aa24.59■■□□□ 1.53
DDX11-210ENST00000537136 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
DDX11-210ENST00000537136 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
DDX11-210ENST00000537136 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
DDX11-210ENST00000537136 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
DDX11-210ENST00000537136 CFTRP13569 1480 aa24.36■■□□□ 1.49
DDX11-210ENST00000537136 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
DDX11-210ENST00000537136 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
DDX11-210ENST00000537136 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
DDX11-210ENST00000537136 WDR62O43379 1518 aa24.3■■□□□ 1.48
DDX11-210ENST00000537136 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
DDX11-210ENST00000537136 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
DDX11-210ENST00000537136 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
DDX11-210ENST00000537136 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
DDX11-210ENST00000537136 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
DDX11-210ENST00000537136 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
DDX11-210ENST00000537136 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
DDX11-210ENST00000537136 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
DDX11-210ENST00000537136 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
DDX11-210ENST00000537136 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
DDX11-210ENST00000537136 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.376e-18■■■■■ 52.7
DDX11-210ENST00000537136 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
DDX11-210ENST00000537136 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
DDX11-210ENST00000537136 SOGA1O94964 1423 aa23.59■■□□□ 1.37
DDX11-210ENST00000537136 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
DDX11-210ENST00000537136 FBLN2P98095 1184 aa23.56■■□□□ 1.36
DDX11-210ENST00000537136 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
DDX11-210ENST00000537136 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
DDX11-210ENST00000537136 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
DDX11-210ENST00000537136 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
DDX11-210ENST00000537136 CUX1P39880 1505 aa23.44■■□□□ 1.34
DDX11-210ENST00000537136 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
DDX11-210ENST00000537136 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
DDX11-210ENST00000537136 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
DDX11-210ENST00000537136 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
DDX11-210ENST00000537136 CYB5RLQ6IPT4 315 aa23.41■■□□□ 1.34
DDX11-210ENST00000537136 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
DDX11-210ENST00000537136 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
DDX11-210ENST00000537136 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
DDX11-210ENST00000537136 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
DDX11-210ENST00000537136 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
DDX11-210ENST00000537136 CHD1O14646 1710 aa23.3■■□□□ 1.32
DDX11-210ENST00000537136 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
DDX11-210ENST00000537136 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
DDX11-210ENST00000537136 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
DDX11-210ENST00000537136 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
DDX11-210ENST00000537136 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
DDX11-210ENST00000537136 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
DDX11-210ENST00000537136 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
DDX11-210ENST00000537136 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
DDX11-210ENST00000537136 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
DDX11-210ENST00000537136 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
DDX11-210ENST00000537136 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
DDX11-210ENST00000537136 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
DDX11-210ENST00000537136 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
DDX11-210ENST00000537136 GRIN2AQ12879 1464 aa23■■□□□ 1.27
DDX11-210ENST00000537136 NUP160Q12769 1436 aa22.94■■□□□ 1.26
DDX11-210ENST00000537136 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
DDX11-210ENST00000537136 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
DDX11-210ENST00000537136 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
DDX11-210ENST00000537136 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
DDX11-210ENST00000537136 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
DDX11-210ENST00000537136 IGF1RP08069 1367 aa22.76■■□□□ 1.23
DDX11-210ENST00000537136 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
DDX11-210ENST00000537136 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
DDX11-210ENST00000537136 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms