RNA–Protein interactions for RNA: ENST00000537113.5

LRRC43-202, Transcript of leucine rich repeat containing 43, humanhuman

TSL 3

Gene LRRC43, Length 669 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43-202ENST00000537113 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
LRRC43-202ENST00000537113 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.17
LRRC43-202ENST00000537113 ABCC9O60706 1549 aa40.54■■■■■ 4.08
LRRC43-202ENST00000537113 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.81
LRRC43-202ENST00000537113 DCAF8L2P0C7V8 631 aa38.7■■■■□ 3.79
LRRC43-202ENST00000537113 NACADO15069 1562 aa38.7■■■■□ 3.79
LRRC43-202ENST00000537113 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
LRRC43-202ENST00000537113 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
LRRC43-202ENST00000537113 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
LRRC43-202ENST00000537113 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.68
LRRC43-202ENST00000537113 PABPN1Q86U42 306 aaKnown RBP eCLIP37.84■■■■□ 3.65
LRRC43-202ENST00000537113 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
LRRC43-202ENST00000537113 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
LRRC43-202ENST00000537113 DNAJC5BQ9UF47 199 aa37.44■■■■□ 3.58
LRRC43-202ENST00000537113 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
LRRC43-202ENST00000537113 EIF4G1Q04637 1599 aaKnown RBP36.71■■■■□ 3.47
LRRC43-202ENST00000537113 CC2D2AQ9P2K1 1620 aa36.65■■■■□ 3.46
LRRC43-202ENST00000537113 CECR2Q9BXF3 1484 aa36.41■■■■□ 3.42
LRRC43-202ENST00000537113 SMARCA4P51532 1647 aa35.89■■■■□ 3.34
LRRC43-202ENST00000537113 BAZ1AQ9NRL2 1556 aaPredicted RBP35.76■■■■□ 3.32
LRRC43-202ENST00000537113 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
LRRC43-202ENST00000537113 NCAPD3P42695 1498 aa35.7■■■■□ 3.31
LRRC43-202ENST00000537113 SMARCA2P51531 1590 aa35.64■■■■□ 3.3
LRRC43-202ENST00000537113 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
LRRC43-202ENST00000537113 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
LRRC43-202ENST00000537113 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
LRRC43-202ENST00000537113 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
LRRC43-202ENST00000537113 WIZO95785 1651 aa35.24■■■■□ 3.23
LRRC43-202ENST00000537113 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
LRRC43-202ENST00000537113 NESP48681 1621 aa35.03■■■■□ 3.2
LRRC43-202ENST00000537113 ERCC6Q03468 1493 aa34.91■■■■□ 3.18
LRRC43-202ENST00000537113 LAMC3Q9Y6N6 1575 aa34.82■■■■□ 3.16
LRRC43-202ENST00000537113 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
LRRC43-202ENST00000537113 CADPSQ9ULU8 1353 aa34.66■■■■□ 3.14
LRRC43-202ENST00000537113 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
LRRC43-202ENST00000537113 CUX2O14529 1486 aa34.59■■■■□ 3.13
LRRC43-202ENST00000537113 PDS5BQ9NTI5 1447 aa34.56■■■■□ 3.12
LRRC43-202ENST00000537113 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
LRRC43-202ENST00000537113 CFTRP13569 1480 aa34.4■■■■□ 3.1
LRRC43-202ENST00000537113 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
LRRC43-202ENST00000537113 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
LRRC43-202ENST00000537113 MRC2Q9UBG0 1479 aa34.27■■■■□ 3.08
LRRC43-202ENST00000537113 CEP164Q9UPV0 1460 aa34.27■■■■□ 3.08
LRRC43-202ENST00000537113 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
LRRC43-202ENST00000537113 WDR62O43379 1518 aa34.17■■■■□ 3.06
LRRC43-202ENST00000537113 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
LRRC43-202ENST00000537113 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
LRRC43-202ENST00000537113 DNAJC5Q9H3Z4 198 aa33.83■■■■□ 3.01
LRRC43-202ENST00000537113 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
LRRC43-202ENST00000537113 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
LRRC43-202ENST00000537113 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
LRRC43-202ENST00000537113 IFT140Q96RY7 1462 aa33.54■■■□□ 2.96
LRRC43-202ENST00000537113 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
LRRC43-202ENST00000537113 POLA1P09884 1462 aaPredicted RBP33.43■■■□□ 2.94
LRRC43-202ENST00000537113 CUX1P39880 1505 aa33.41■■■□□ 2.94
LRRC43-202ENST00000537113 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.94
LRRC43-202ENST00000537113 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
LRRC43-202ENST00000537113 FGD5Q6ZNL6 1462 aa33.32■■■□□ 2.92
LRRC43-202ENST00000537113 RAD54L2Q9Y4B4 1467 aa33.32■■■□□ 2.92
LRRC43-202ENST00000537113 SOGA1O94964 1423 aa33.27■■■□□ 2.92
LRRC43-202ENST00000537113 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.91
LRRC43-202ENST00000537113 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
LRRC43-202ENST00000537113 OSCARQ8IYS5 282 aa33.12■■■□□ 2.89
LRRC43-202ENST00000537113 WDR97A6NE52 1622 aa33.09■■■□□ 2.89
LRRC43-202ENST00000537113 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
LRRC43-202ENST00000537113 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
LRRC43-202ENST00000537113 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
LRRC43-202ENST00000537113 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
LRRC43-202ENST00000537113 CHD1O14646 1710 aa33■■■□□ 2.87
LRRC43-202ENST00000537113 ABCA10Q8WWZ4 1543 aa32.95■■■□□ 2.87
LRRC43-202ENST00000537113 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
LRRC43-202ENST00000537113 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
LRRC43-202ENST00000537113 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
LRRC43-202ENST00000537113 FBLN2P98095 1184 aa32.89■■■□□ 2.86
LRRC43-202ENST00000537113 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
LRRC43-202ENST00000537113 GAPVD1Q14C86 1478 aa32.88■■■□□ 2.85
LRRC43-202ENST00000537113 MAGI1Q96QZ7 1491 aaPredicted RBP32.82■■■□□ 2.84
LRRC43-202ENST00000537113 CHMP7Q8WUX9 453 aaPredicted RBP32.72■■■□□ 2.83
LRRC43-202ENST00000537113 SYNJ2O15056 1496 aa32.71■■■□□ 2.83
LRRC43-202ENST00000537113 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
LRRC43-202ENST00000537113 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
LRRC43-202ENST00000537113 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
LRRC43-202ENST00000537113 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
LRRC43-202ENST00000537113 ARHGEF11O15085 1522 aa32.63■■■□□ 2.81
LRRC43-202ENST00000537113 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
LRRC43-202ENST00000537113 CLASP1Q7Z460 1538 aa32.57■■■□□ 2.8
LRRC43-202ENST00000537113 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
LRRC43-202ENST00000537113 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
LRRC43-202ENST00000537113 FHAD1B1AJZ9 1412 aa32.47■■■□□ 2.79
LRRC43-202ENST00000537113 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
LRRC43-202ENST00000537113 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
LRRC43-202ENST00000537113 KIF27Q86VH2 1401 aa32.37■■■□□ 2.77
LRRC43-202ENST00000537113 NUP160Q12769 1436 aa32.34■■■□□ 2.77
LRRC43-202ENST00000537113 CYB5RLQ6IPT4 315 aa32.34■■■□□ 2.77
LRRC43-202ENST00000537113 IGF1RP08069 1367 aa32.29■■■□□ 2.76
LRRC43-202ENST00000537113 CUL7Q14999 1698 aa32.22■■■□□ 2.75
LRRC43-202ENST00000537113 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
LRRC43-202ENST00000537113 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
LRRC43-202ENST00000537113 RUSC2Q8N2Y8 1516 aa32.11■■■□□ 2.73
LRRC43-202ENST00000537113 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms