RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 NISCHQ9Y2I1 1504 aa34.63■■■■□ 3.13
COPS7A-206ENST00000537022 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
COPS7A-206ENST00000537022 ABCC9O60706 1549 aa31.1■■■□□ 2.57
COPS7A-206ENST00000537022 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
COPS7A-206ENST00000537022 NACADO15069 1562 aa29.47■■■□□ 2.31
COPS7A-206ENST00000537022 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
COPS7A-206ENST00000537022 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
COPS7A-206ENST00000537022 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
COPS7A-206ENST00000537022 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
COPS7A-206ENST00000537022 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
COPS7A-206ENST00000537022 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
COPS7A-206ENST00000537022 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
COPS7A-206ENST00000537022 DCAF1Q9Y4B6 1507 aa28.68■■■□□ 2.18
COPS7A-206ENST00000537022 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
COPS7A-206ENST00000537022 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
COPS7A-206ENST00000537022 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
COPS7A-206ENST00000537022 EIF4G1Q04637 1599 aaKnown RBP28.1■■■□□ 2.09
COPS7A-206ENST00000537022 CECR2Q9BXF3 1484 aa28.05■■■□□ 2.08
COPS7A-206ENST00000537022 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
COPS7A-206ENST00000537022 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
COPS7A-206ENST00000537022 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
COPS7A-206ENST00000537022 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
COPS7A-206ENST00000537022 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
COPS7A-206ENST00000537022 CUX2O14529 1486 aa26.93■■□□□ 1.9
COPS7A-206ENST00000537022 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
COPS7A-206ENST00000537022 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
COPS7A-206ENST00000537022 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
COPS7A-206ENST00000537022 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
COPS7A-206ENST00000537022 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
COPS7A-206ENST00000537022 NESP48681 1621 aa26.7■■□□□ 1.86
COPS7A-206ENST00000537022 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
COPS7A-206ENST00000537022 LAMC3Q9Y6N6 1575 aa26.62■■□□□ 1.85
COPS7A-206ENST00000537022 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
COPS7A-206ENST00000537022 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
COPS7A-206ENST00000537022 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
COPS7A-206ENST00000537022 WIZO95785 1651 aa26.36■■□□□ 1.81
COPS7A-206ENST00000537022 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
COPS7A-206ENST00000537022 MRC2Q9UBG0 1479 aa26.19■■□□□ 1.78
COPS7A-206ENST00000537022 WDR62O43379 1518 aa26.16■■□□□ 1.78
COPS7A-206ENST00000537022 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
COPS7A-206ENST00000537022 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
COPS7A-206ENST00000537022 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
COPS7A-206ENST00000537022 CFTRP13569 1480 aa26.02■■□□□ 1.76
COPS7A-206ENST00000537022 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
COPS7A-206ENST00000537022 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
COPS7A-206ENST00000537022 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
COPS7A-206ENST00000537022 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
COPS7A-206ENST00000537022 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
COPS7A-206ENST00000537022 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
COPS7A-206ENST00000537022 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
COPS7A-206ENST00000537022 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
COPS7A-206ENST00000537022 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
COPS7A-206ENST00000537022 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
COPS7A-206ENST00000537022 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
COPS7A-206ENST00000537022 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
COPS7A-206ENST00000537022 TARBP1Q13395 1621 aaKnown RBP25.36■■□□□ 1.65
COPS7A-206ENST00000537022 RIMBP3CA6NJZ7 1639 aa25.35■■□□□ 1.65
COPS7A-206ENST00000537022 RIMBP3BA6NNM3 1639 aa25.35■■□□□ 1.65
COPS7A-206ENST00000537022 RIMBP3Q9UFD9 1639 aa25.35■■□□□ 1.65
COPS7A-206ENST00000537022 CHD1O14646 1710 aa25.26■■□□□ 1.63
COPS7A-206ENST00000537022 POLA1P09884 1462 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-206ENST00000537022 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
COPS7A-206ENST00000537022 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
COPS7A-206ENST00000537022 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
COPS7A-206ENST00000537022 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
COPS7A-206ENST00000537022 SOGA1O94964 1423 aa25.11■■□□□ 1.61
COPS7A-206ENST00000537022 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
COPS7A-206ENST00000537022 CUX1P39880 1505 aa25.06■■□□□ 1.6
COPS7A-206ENST00000537022 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
COPS7A-206ENST00000537022 FBLN2P98095 1184 aa24.99■■□□□ 1.59
COPS7A-206ENST00000537022 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
COPS7A-206ENST00000537022 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
COPS7A-206ENST00000537022 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
COPS7A-206ENST00000537022 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
COPS7A-206ENST00000537022 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
COPS7A-206ENST00000537022 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
COPS7A-206ENST00000537022 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
COPS7A-206ENST00000537022 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
COPS7A-206ENST00000537022 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
COPS7A-206ENST00000537022 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
COPS7A-206ENST00000537022 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
COPS7A-206ENST00000537022 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
COPS7A-206ENST00000537022 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
COPS7A-206ENST00000537022 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
COPS7A-206ENST00000537022 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
COPS7A-206ENST00000537022 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
COPS7A-206ENST00000537022 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
COPS7A-206ENST00000537022 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
COPS7A-206ENST00000537022 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
COPS7A-206ENST00000537022 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
COPS7A-206ENST00000537022 NUP160Q12769 1436 aa24.55■■□□□ 1.52
COPS7A-206ENST00000537022 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
COPS7A-206ENST00000537022 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
COPS7A-206ENST00000537022 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
COPS7A-206ENST00000537022 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
COPS7A-206ENST00000537022 ERCC6L2Q5T890 1561 aa24.49■■□□□ 1.51
COPS7A-206ENST00000537022 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
COPS7A-206ENST00000537022 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
COPS7A-206ENST00000537022 KIF13AQ9H1H9 1805 aa24.23■■□□□ 1.47
COPS7A-206ENST00000537022 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms