RNA–Protein interactions for RNA: ENST00000536943.1

OTUB1-208, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-208ENST00000536943 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
OTUB1-208ENST00000536943 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.28
OTUB1-208ENST00000536943 ABCC9O60706 1549 aa35.24■■■■□ 3.23
OTUB1-208ENST00000536943 RB1CC1Q8TDY2 1594 aa33.73■■■□□ 2.99
OTUB1-208ENST00000536943 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
OTUB1-208ENST00000536943 NACADO15069 1562 aa33.56■■■□□ 2.96
OTUB1-208ENST00000536943 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
OTUB1-208ENST00000536943 ZCCHC6Q5VYS8 1495 aaKnown RBP33.05■■■□□ 2.88
OTUB1-208ENST00000536943 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
OTUB1-208ENST00000536943 PABPN1Q86U42 306 aaKnown RBP eCLIP32.89■■■□□ 2.86
OTUB1-208ENST00000536943 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
OTUB1-208ENST00000536943 DNAJC5BQ9UF47 199 aa32.62■■■□□ 2.81
OTUB1-208ENST00000536943 BICRAQ9NZM4 1560 aa32.6■■■□□ 2.81
OTUB1-208ENST00000536943 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
OTUB1-208ENST00000536943 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
OTUB1-208ENST00000536943 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
OTUB1-208ENST00000536943 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.68
OTUB1-208ENST00000536943 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
OTUB1-208ENST00000536943 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
OTUB1-208ENST00000536943 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
OTUB1-208ENST00000536943 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
OTUB1-208ENST00000536943 ATAD2BQ9ULI0 1458 aa30.92■■■□□ 2.54
OTUB1-208ENST00000536943 SMARCA2P51531 1590 aa30.91■■■□□ 2.54
OTUB1-208ENST00000536943 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
OTUB1-208ENST00000536943 BAZ1BQ9UIG0 1483 aaKnown RBP30.7■■■□□ 2.51
OTUB1-208ENST00000536943 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
OTUB1-208ENST00000536943 PEG3Q9GZU2 1588 aa30.63■■■□□ 2.49
OTUB1-208ENST00000536943 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
OTUB1-208ENST00000536943 WIZO95785 1651 aa30.33■■■□□ 2.45
OTUB1-208ENST00000536943 NESP48681 1621 aa30.33■■■□□ 2.45
OTUB1-208ENST00000536943 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
OTUB1-208ENST00000536943 CUX2O14529 1486 aa30.22■■■□□ 2.43
OTUB1-208ENST00000536943 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
OTUB1-208ENST00000536943 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
OTUB1-208ENST00000536943 CADPSQ9ULU8 1353 aa30.08■■■□□ 2.41
OTUB1-208ENST00000536943 TOP2AP11388 1531 aaKnown RBP29.99■■■□□ 2.39
OTUB1-208ENST00000536943 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
OTUB1-208ENST00000536943 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
OTUB1-208ENST00000536943 CFTRP13569 1480 aa29.77■■■□□ 2.36
OTUB1-208ENST00000536943 MRC2Q9UBG0 1479 aa29.76■■■□□ 2.35
OTUB1-208ENST00000536943 DNAJC5Q9H3Z4 198 aa29.76■■■□□ 2.35
OTUB1-208ENST00000536943 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
OTUB1-208ENST00000536943 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
OTUB1-208ENST00000536943 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
OTUB1-208ENST00000536943 WDR62O43379 1518 aa29.63■■■□□ 2.33
OTUB1-208ENST00000536943 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
OTUB1-208ENST00000536943 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
OTUB1-208ENST00000536943 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
OTUB1-208ENST00000536943 ABCC8Q09428 1581 aa29.23■■■□□ 2.27
OTUB1-208ENST00000536943 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
OTUB1-208ENST00000536943 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
OTUB1-208ENST00000536943 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
OTUB1-208ENST00000536943 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
OTUB1-208ENST00000536943 ZNF608Q9ULD9 1512 aaPredicted RBP28.98■■■□□ 2.23
OTUB1-208ENST00000536943 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
OTUB1-208ENST00000536943 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
OTUB1-208ENST00000536943 TARBP1Q13395 1621 aaKnown RBP28.86■■■□□ 2.21
OTUB1-208ENST00000536943 SOGA1O94964 1423 aa28.85■■■□□ 2.21
OTUB1-208ENST00000536943 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.2
OTUB1-208ENST00000536943 CUX1P39880 1505 aa28.79■■■□□ 2.2
OTUB1-208ENST00000536943 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
OTUB1-208ENST00000536943 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
OTUB1-208ENST00000536943 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
OTUB1-208ENST00000536943 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
OTUB1-208ENST00000536943 FBLN2P98095 1184 aa28.68■■■□□ 2.18
OTUB1-208ENST00000536943 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
OTUB1-208ENST00000536943 CHD1O14646 1710 aa28.57■■■□□ 2.16
OTUB1-208ENST00000536943 GRIN2BQ13224 1484 aa28.54■■■□□ 2.16
OTUB1-208ENST00000536943 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
OTUB1-208ENST00000536943 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
OTUB1-208ENST00000536943 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
OTUB1-208ENST00000536943 GAPVD1Q14C86 1478 aa28.49■■■□□ 2.15
OTUB1-208ENST00000536943 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
OTUB1-208ENST00000536943 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
OTUB1-208ENST00000536943 TOP2BQ02880 1626 aa28.46■■■□□ 2.15
OTUB1-208ENST00000536943 RIMBP3CA6NJZ7 1639 aa28.45■■■□□ 2.14
OTUB1-208ENST00000536943 RIMBP3BA6NNM3 1639 aa28.45■■■□□ 2.14
OTUB1-208ENST00000536943 RIMBP3Q9UFD9 1639 aa28.45■■■□□ 2.14
OTUB1-208ENST00000536943 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
OTUB1-208ENST00000536943 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
OTUB1-208ENST00000536943 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
OTUB1-208ENST00000536943 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
OTUB1-208ENST00000536943 SYNJ2O15056 1496 aa28.38■■■□□ 2.13
OTUB1-208ENST00000536943 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
OTUB1-208ENST00000536943 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
OTUB1-208ENST00000536943 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
OTUB1-208ENST00000536943 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
OTUB1-208ENST00000536943 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
OTUB1-208ENST00000536943 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
OTUB1-208ENST00000536943 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
OTUB1-208ENST00000536943 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
OTUB1-208ENST00000536943 NUP160Q12769 1436 aa28.01■■■□□ 2.07
OTUB1-208ENST00000536943 KIF27Q86VH2 1401 aa28■■■□□ 2.07
OTUB1-208ENST00000536943 CEP170Q5SW79 1584 aa27.98■■■□□ 2.07
OTUB1-208ENST00000536943 TRHP20396 242 aaPredicted RBP27.91■■■□□ 2.06
OTUB1-208ENST00000536943 IGF1RP08069 1367 aa27.87■■■□□ 2.05
OTUB1-208ENST00000536943 CUL7Q14999 1698 aa27.84■■■□□ 2.05
OTUB1-208ENST00000536943 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
OTUB1-208ENST00000536943 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
OTUB1-208ENST00000536943 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms