RNA–Protein interactions for RNA: ENST00000536917.1

LRTOMT-212, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-212ENST00000536917 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
LRTOMT-212ENST00000536917 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
LRTOMT-212ENST00000536917 ABCC9O60706 1549 aa18.17■□□□□ 0.5
LRTOMT-212ENST00000536917 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
LRTOMT-212ENST00000536917 NACADO15069 1562 aa17.29■□□□□ 0.36
LRTOMT-212ENST00000536917 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
LRTOMT-212ENST00000536917 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
LRTOMT-212ENST00000536917 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
LRTOMT-212ENST00000536917 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
LRTOMT-212ENST00000536917 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
LRTOMT-212ENST00000536917 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
LRTOMT-212ENST00000536917 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
LRTOMT-212ENST00000536917 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
LRTOMT-212ENST00000536917 SHROOM4Q9ULL8 1493 aa16.68■□□□□ 0.26
LRTOMT-212ENST00000536917 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
LRTOMT-212ENST00000536917 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
LRTOMT-212ENST00000536917 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
LRTOMT-212ENST00000536917 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
LRTOMT-212ENST00000536917 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
LRTOMT-212ENST00000536917 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
LRTOMT-212ENST00000536917 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
LRTOMT-212ENST00000536917 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
LRTOMT-212ENST00000536917 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
LRTOMT-212ENST00000536917 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
LRTOMT-212ENST00000536917 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
LRTOMT-212ENST00000536917 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
LRTOMT-212ENST00000536917 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
LRTOMT-212ENST00000536917 NESP48681 1621 aa15.66■□□□□ 0.1
LRTOMT-212ENST00000536917 CUX2O14529 1486 aa15.65■□□□□ 0.1
LRTOMT-212ENST00000536917 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
LRTOMT-212ENST00000536917 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.08
LRTOMT-212ENST00000536917 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
LRTOMT-212ENST00000536917 WIZO95785 1651 aa15.56■□□□□ 0.08
LRTOMT-212ENST00000536917 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
LRTOMT-212ENST00000536917 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
LRTOMT-212ENST00000536917 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
LRTOMT-212ENST00000536917 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
LRTOMT-212ENST00000536917 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
LRTOMT-212ENST00000536917 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
LRTOMT-212ENST00000536917 CFTRP13569 1480 aa15.33■□□□□ 0.04
LRTOMT-212ENST00000536917 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
LRTOMT-212ENST00000536917 WDR62O43379 1518 aa15.32■□□□□ 0.04
LRTOMT-212ENST00000536917 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
LRTOMT-212ENST00000536917 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.04
LRTOMT-212ENST00000536917 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
LRTOMT-212ENST00000536917 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
LRTOMT-212ENST00000536917 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
LRTOMT-212ENST00000536917 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
LRTOMT-212ENST00000536917 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
LRTOMT-212ENST00000536917 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
LRTOMT-212ENST00000536917 DNMBPQ6XZF7 1577 aa14.96□□□□□ -0.01
LRTOMT-212ENST00000536917 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
LRTOMT-212ENST00000536917 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
LRTOMT-212ENST00000536917 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
LRTOMT-212ENST00000536917 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
LRTOMT-212ENST00000536917 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
LRTOMT-212ENST00000536917 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
LRTOMT-212ENST00000536917 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
LRTOMT-212ENST00000536917 CUX1P39880 1505 aa14.8□□□□□ -0.04
LRTOMT-212ENST00000536917 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
LRTOMT-212ENST00000536917 SOGA1O94964 1423 aa14.77□□□□□ -0.04
LRTOMT-212ENST00000536917 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
LRTOMT-212ENST00000536917 CHD1O14646 1710 aa14.75□□□□□ -0.05
LRTOMT-212ENST00000536917 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
LRTOMT-212ENST00000536917 RIMBP3CA6NJZ7 1639 aa14.75□□□□□ -0.05
LRTOMT-212ENST00000536917 RIMBP3BA6NNM3 1639 aa14.75□□□□□ -0.05
LRTOMT-212ENST00000536917 RIMBP3Q9UFD9 1639 aa14.75□□□□□ -0.05
LRTOMT-212ENST00000536917 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
LRTOMT-212ENST00000536917 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
LRTOMT-212ENST00000536917 ARHGEF11O15085 1522 aa14.71□□□□□ -0.06
LRTOMT-212ENST00000536917 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
LRTOMT-212ENST00000536917 GRIN2BQ13224 1484 aa14.64□□□□□ -0.07
LRTOMT-212ENST00000536917 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
LRTOMT-212ENST00000536917 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
LRTOMT-212ENST00000536917 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
LRTOMT-212ENST00000536917 FBLN2P98095 1184 aa14.61□□□□□ -0.07
LRTOMT-212ENST00000536917 ABCA5Q8WWZ7 1642 aa14.61□□□□□ -0.07
LRTOMT-212ENST00000536917 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
LRTOMT-212ENST00000536917 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
LRTOMT-212ENST00000536917 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
LRTOMT-212ENST00000536917 SYNJ2O15056 1496 aa14.59□□□□□ -0.07
LRTOMT-212ENST00000536917 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
LRTOMT-212ENST00000536917 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
LRTOMT-212ENST00000536917 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
LRTOMT-212ENST00000536917 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
LRTOMT-212ENST00000536917 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
LRTOMT-212ENST00000536917 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
LRTOMT-212ENST00000536917 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
LRTOMT-212ENST00000536917 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
LRTOMT-212ENST00000536917 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
LRTOMT-212ENST00000536917 NUP160Q12769 1436 aa14.44□□□□□ -0.1
LRTOMT-212ENST00000536917 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
LRTOMT-212ENST00000536917 CEP170Q5SW79 1584 aa14.42□□□□□ -0.1
LRTOMT-212ENST00000536917 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
LRTOMT-212ENST00000536917 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
LRTOMT-212ENST00000536917 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
LRTOMT-212ENST00000536917 IGF1RP08069 1367 aa14.29□□□□□ -0.12
LRTOMT-212ENST00000536917 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.12
LRTOMT-212ENST00000536917 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
LRTOMT-212ENST00000536917 JPH4Q96JJ6 628 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms