RNA–Protein interactions for RNA: ENST00000536842.5

SLC6A13-205, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 1,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-205ENST00000536842 NISCHQ9Y2I1 1504 aa47.37■■■■■ 5.17
SLC6A13-205ENST00000536842 CCDC180Q9P1Z9 1646 aa42.26■■■■■ 4.36
SLC6A13-205ENST00000536842 ABCC9O60706 1549 aa42■■■■■ 4.31
SLC6A13-205ENST00000536842 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
SLC6A13-205ENST00000536842 DCAF8L2P0C7V8 631 aa39.98■■■■□ 3.99
SLC6A13-205ENST00000536842 NACADO15069 1562 aa39.86■■■■□ 3.97
SLC6A13-205ENST00000536842 MYO15BQ96JP2 1530 aa39.39■■■■□ 3.9
SLC6A13-205ENST00000536842 ZCCHC6Q5VYS8 1495 aaKnown RBP39.33■■■■□ 3.89
SLC6A13-205ENST00000536842 UNC13AQ9UPW8 1703 aa39.23■■■■□ 3.87
SLC6A13-205ENST00000536842 PABPN1Q86U42 306 aaKnown RBP eCLIP39.23■■■■□ 3.87
SLC6A13-205ENST00000536842 DCAF1Q9Y4B6 1507 aa39.07■■■■□ 3.84
SLC6A13-205ENST00000536842 DNAJC5BQ9UF47 199 aa39.06■■■■□ 3.84
SLC6A13-205ENST00000536842 BICRAQ9NZM4 1560 aa38.92■■■■□ 3.82
SLC6A13-205ENST00000536842 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
SLC6A13-205ENST00000536842 SHROOM4Q9ULL8 1493 aa38.28■■■■□ 3.72
SLC6A13-205ENST00000536842 EIF4G1Q04637 1599 aaKnown RBP37.92■■■■□ 3.66
SLC6A13-205ENST00000536842 CC2D2AQ9P2K1 1620 aa37.91■■■■□ 3.66
SLC6A13-205ENST00000536842 CECR2Q9BXF3 1484 aa37.74■■■■□ 3.63
SLC6A13-205ENST00000536842 SMARCA4P51532 1647 aa36.88■■■■□ 3.49
SLC6A13-205ENST00000536842 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
SLC6A13-205ENST00000536842 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
SLC6A13-205ENST00000536842 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
SLC6A13-205ENST00000536842 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
SLC6A13-205ENST00000536842 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.44
SLC6A13-205ENST00000536842 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
SLC6A13-205ENST00000536842 BAZ1BQ9UIG0 1483 aaKnown RBP36.47■■■■□ 3.43
SLC6A13-205ENST00000536842 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
SLC6A13-205ENST00000536842 NESP48681 1621 aa36.22■■■■□ 3.39
SLC6A13-205ENST00000536842 ERCC6Q03468 1493 aa36.19■■■■□ 3.38
SLC6A13-205ENST00000536842 WIZO95785 1651 aa36.16■■■■□ 3.38
SLC6A13-205ENST00000536842 RSF1Q96T23 1441 aaPredicted RBP35.94■■■■□ 3.34
SLC6A13-205ENST00000536842 LAMC3Q9Y6N6 1575 aa35.91■■■■□ 3.34
SLC6A13-205ENST00000536842 CUX2O14529 1486 aa35.9■■■■□ 3.34
SLC6A13-205ENST00000536842 CADPSQ9ULU8 1353 aa35.75■■■■□ 3.31
SLC6A13-205ENST00000536842 KIF21AQ7Z4S6 1674 aa35.73■■■■□ 3.31
SLC6A13-205ENST00000536842 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
SLC6A13-205ENST00000536842 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
SLC6A13-205ENST00000536842 TOP2AP11388 1531 aaKnown RBP35.66■■■■□ 3.3
SLC6A13-205ENST00000536842 DNAJC5Q9H3Z4 198 aa35.47■■■■□ 3.27
SLC6A13-205ENST00000536842 CFTRP13569 1480 aa35.41■■■■□ 3.26
SLC6A13-205ENST00000536842 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
SLC6A13-205ENST00000536842 FANCD2Q9BXW9 1451 aa35.36■■■■□ 3.25
SLC6A13-205ENST00000536842 CEP164Q9UPV0 1460 aa35.34■■■■□ 3.25
SLC6A13-205ENST00000536842 CCDC88BA6NC98 1476 aa35.3■■■■□ 3.24
SLC6A13-205ENST00000536842 WDR62O43379 1518 aa35.27■■■■□ 3.24
SLC6A13-205ENST00000536842 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
SLC6A13-205ENST00000536842 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
SLC6A13-205ENST00000536842 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
SLC6A13-205ENST00000536842 TOPBP1Q92547 1522 aa34.74■■■■□ 3.15
SLC6A13-205ENST00000536842 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
SLC6A13-205ENST00000536842 ABCC8Q09428 1581 aa34.61■■■■□ 3.13
SLC6A13-205ENST00000536842 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
SLC6A13-205ENST00000536842 ZNF608Q9ULD9 1512 aaPredicted RBP34.59■■■■□ 3.13
SLC6A13-205ENST00000536842 POLA1P09884 1462 aaPredicted RBP34.41■■■■□ 3.1
SLC6A13-205ENST00000536842 OSCARQ8IYS5 282 aa34.41■■■■□ 3.1
SLC6A13-205ENST00000536842 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
SLC6A13-205ENST00000536842 EIF4G3O43432 1585 aaKnown RBP34.37■■■■□ 3.09
SLC6A13-205ENST00000536842 RAD54L2Q9Y4B4 1467 aa34.34■■■■□ 3.09
SLC6A13-205ENST00000536842 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.09
SLC6A13-205ENST00000536842 CUX1P39880 1505 aa34.31■■■■□ 3.08
SLC6A13-205ENST00000536842 SOGA1O94964 1423 aa34.28■■■■□ 3.08
SLC6A13-205ENST00000536842 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
SLC6A13-205ENST00000536842 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
SLC6A13-205ENST00000536842 TDRD9Q8NDG6 1382 aaKnown RBP34.21■■■■□ 3.07
SLC6A13-205ENST00000536842 FBLN2P98095 1184 aa34.08■■■■□ 3.05
SLC6A13-205ENST00000536842 CHD1O14646 1710 aa34.07■■■■□ 3.04
SLC6A13-205ENST00000536842 WDR97A6NE52 1622 aa33.97■■■■□ 3.03
SLC6A13-205ENST00000536842 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
SLC6A13-205ENST00000536842 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
SLC6A13-205ENST00000536842 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
SLC6A13-205ENST00000536842 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
SLC6A13-205ENST00000536842 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
SLC6A13-205ENST00000536842 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
SLC6A13-205ENST00000536842 SYNJ1O43426 1573 aa33.87■■■■□ 3.01
SLC6A13-205ENST00000536842 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
SLC6A13-205ENST00000536842 GAPVD1Q14C86 1478 aa33.86■■■■□ 3.01
SLC6A13-205ENST00000536842 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
SLC6A13-205ENST00000536842 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
SLC6A13-205ENST00000536842 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
SLC6A13-205ENST00000536842 CHMP7Q8WUX9 453 aaPredicted RBP33.83■■■■□ 3.01
SLC6A13-205ENST00000536842 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3.01
SLC6A13-205ENST00000536842 PBRM1Q86U86 1689 aa33.82■■■■□ 3
SLC6A13-205ENST00000536842 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
SLC6A13-205ENST00000536842 SYNJ2O15056 1496 aa33.73■■■□□ 2.99
SLC6A13-205ENST00000536842 CYB5RLQ6IPT4 315 aa33.64■■■□□ 2.98
SLC6A13-205ENST00000536842 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
SLC6A13-205ENST00000536842 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
SLC6A13-205ENST00000536842 ADAMTS12P58397 1594 aa33.51■■■□□ 2.95
SLC6A13-205ENST00000536842 GRIN2AQ12879 1464 aa33.47■■■□□ 2.95
SLC6A13-205ENST00000536842 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
SLC6A13-205ENST00000536842 FHAD1B1AJZ9 1412 aa33.42■■■□□ 2.94
SLC6A13-205ENST00000536842 CEP170Q5SW79 1584 aa33.36■■■□□ 2.93
SLC6A13-205ENST00000536842 NUP160Q12769 1436 aa33.31■■■□□ 2.92
SLC6A13-205ENST00000536842 ERCC6L2Q5T890 1561 aa33.23■■■□□ 2.91
SLC6A13-205ENST00000536842 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
SLC6A13-205ENST00000536842 IGF1RP08069 1367 aa33.17■■■□□ 2.9
SLC6A13-205ENST00000536842 TRHP20396 242 aaPredicted RBP33.15■■■□□ 2.9
SLC6A13-205ENST00000536842 SHROOM2Q13796 1616 aa33.12■■■□□ 2.89
SLC6A13-205ENST00000536842 JPH4Q96JJ6 628 aa33.04■■■□□ 2.88
SLC6A13-205ENST00000536842 CUL7Q14999 1698 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms