RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 NISCHQ9Y2I1 1504 aa48.01■■■■■ 5.28
USP30-209ENST00000536723 ABCC9O60706 1549 aa44.34■■■■■ 4.69
USP30-209ENST00000536723 CCDC180Q9P1Z9 1646 aa43.32■■■■■ 4.53
USP30-209ENST00000536723 DNAJC5BQ9UF47 199 aa42.49■■■■■ 4.39
USP30-209ENST00000536723 RB1CC1Q8TDY2 1594 aa41.73■■■■■ 4.27
USP30-209ENST00000536723 NACADO15069 1562 aa41.25■■■■■ 4.19
USP30-209ENST00000536723 PABPN1Q86U42 306 aaKnown RBP eCLIP41.23■■■■■ 4.19
USP30-209ENST00000536723 DCAF8L2P0C7V8 631 aa41.02■■■■■ 4.16
USP30-209ENST00000536723 UNC13AQ9UPW8 1703 aa40.7■■■■■ 4.11
USP30-209ENST00000536723 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
USP30-209ENST00000536723 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.06
USP30-209ENST00000536723 CECR2Q9BXF3 1484 aa40.02■■■■■ 4
USP30-209ENST00000536723 CC2D2AQ9P2K1 1620 aa39.95■■■■□ 3.99
USP30-209ENST00000536723 SHROOM4Q9ULL8 1493 aa39.88■■■■□ 3.98
USP30-209ENST00000536723 EIF4G1Q04637 1599 aaKnown RBP39.65■■■■□ 3.94
USP30-209ENST00000536723 DNAJC5Q9H3Z4 198 aa39.6■■■■□ 3.93
USP30-209ENST00000536723 ZCCHC6Q5VYS8 1495 aaKnown RBP39.57■■■■□ 3.93
USP30-209ENST00000536723 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
USP30-209ENST00000536723 SCRIBQ14160 1630 aa39.51■■■■□ 3.91
USP30-209ENST00000536723 CUX2O14529 1486 aa38.51■■■■□ 3.76
USP30-209ENST00000536723 ERCC6Q03468 1493 aa38.31■■■■□ 3.72
USP30-209ENST00000536723 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
USP30-209ENST00000536723 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
USP30-209ENST00000536723 NESP48681 1621 aa37.85■■■■□ 3.65
USP30-209ENST00000536723 HMGXB3Q12766 1538 aa37.71■■■■□ 3.63
USP30-209ENST00000536723 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
USP30-209ENST00000536723 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
USP30-209ENST00000536723 THOC2Q8NI27 1593 aaKnown RBP37.55■■■■□ 3.6
USP30-209ENST00000536723 TRIM41Q8WV44 630 aa37.51■■■■□ 3.6
USP30-209ENST00000536723 BAZ1BQ9UIG0 1483 aaKnown RBP37.46■■■■□ 3.59
USP30-209ENST00000536723 LAMC3Q9Y6N6 1575 aa37.35■■■■□ 3.57
USP30-209ENST00000536723 BAZ1AQ9NRL2 1556 aaPredicted RBP37.28■■■■□ 3.56
USP30-209ENST00000536723 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
USP30-209ENST00000536723 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
USP30-209ENST00000536723 KIF21AQ7Z4S6 1674 aa37.21■■■■□ 3.55
USP30-209ENST00000536723 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
USP30-209ENST00000536723 CADPSQ9ULU8 1353 aa36.97■■■■□ 3.51
USP30-209ENST00000536723 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
USP30-209ENST00000536723 WDR62O43379 1518 aa36.86■■■■□ 3.49
USP30-209ENST00000536723 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
USP30-209ENST00000536723 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
USP30-209ENST00000536723 FANCD2Q9BXW9 1451 aa36.53■■■■□ 3.44
USP30-209ENST00000536723 WIZO95785 1651 aa36.47■■■■□ 3.43
USP30-209ENST00000536723 CFTRP13569 1480 aa36.34■■■■□ 3.41
USP30-209ENST00000536723 URB2Q14146 1524 aaKnown RBP36.29■■■■□ 3.4
USP30-209ENST00000536723 RIMBP3CA6NJZ7 1639 aa36.22■■■■□ 3.39
USP30-209ENST00000536723 RIMBP3BA6NNM3 1639 aa36.22■■■■□ 3.39
USP30-209ENST00000536723 RIMBP3Q9UFD9 1639 aa36.22■■■■□ 3.39
USP30-209ENST00000536723 ARHGEF11O15085 1522 aa36.05■■■■□ 3.36
USP30-209ENST00000536723 ZNF608Q9ULD9 1512 aaPredicted RBP36■■■■□ 3.35
USP30-209ENST00000536723 RSF1Q96T23 1441 aaPredicted RBP35.94■■■■□ 3.34
USP30-209ENST00000536723 CYB5RLQ6IPT4 315 aa35.94■■■■□ 3.34
USP30-209ENST00000536723 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
USP30-209ENST00000536723 IFT140Q96RY7 1462 aa35.92■■■■□ 3.34
USP30-209ENST00000536723 TRHP20396 242 aaPredicted RBP35.81■■■■□ 3.32
USP30-209ENST00000536723 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
USP30-209ENST00000536723 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
USP30-209ENST00000536723 EIF4G3O43432 1585 aaKnown RBP35.66■■■■□ 3.3
USP30-209ENST00000536723 ARAP1Q96P48 1450 aa35.65■■■■□ 3.3
USP30-209ENST00000536723 CCDC88BA6NC98 1476 aa35.61■■■■□ 3.29
USP30-209ENST00000536723 AQRO60306 1485 aaKnown RBP eCLIP35.59■■■■□ 3.29
USP30-209ENST00000536723 ABCC8Q09428 1581 aa35.56■■■■□ 3.28
USP30-209ENST00000536723 FBLN2P98095 1184 aa35.56■■■■□ 3.28
USP30-209ENST00000536723 CHD1O14646 1710 aa35.52■■■■□ 3.28
USP30-209ENST00000536723 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
USP30-209ENST00000536723 TARBP1Q13395 1621 aaKnown RBP35.44■■■■□ 3.26
USP30-209ENST00000536723 AEBP2Q6ZN18 517 aaPredicted RBP35.38■■■■□ 3.25
USP30-209ENST00000536723 POLA1P09884 1462 aaPredicted RBP35.31■■■■□ 3.24
USP30-209ENST00000536723 TDRD9Q8NDG6 1382 aaKnown RBP35.25■■■■□ 3.23
USP30-209ENST00000536723 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
USP30-209ENST00000536723 SOGA1O94964 1423 aa35.17■■■■□ 3.22
USP30-209ENST00000536723 CLASP1Q7Z460 1538 aa35.16■■■■□ 3.22
USP30-209ENST00000536723 SNAPC4Q5SXM2 1469 aa35.15■■■■□ 3.22
USP30-209ENST00000536723 CHMP7Q8WUX9 453 aaPredicted RBP35.14■■■■□ 3.22
USP30-209ENST00000536723 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
USP30-209ENST00000536723 MAGI1Q96QZ7 1491 aaPredicted RBP34.98■■■■□ 3.19
USP30-209ENST00000536723 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
USP30-209ENST00000536723 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
USP30-209ENST00000536723 GRIN2BQ13224 1484 aa34.92■■■■□ 3.18
USP30-209ENST00000536723 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
USP30-209ENST00000536723 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
USP30-209ENST00000536723 CUX1P39880 1505 aa34.79■■■■□ 3.16
USP30-209ENST00000536723 PBRM1Q86U86 1689 aa34.61■■■■□ 3.13
USP30-209ENST00000536723 ERCC6L2Q5T890 1561 aa34.61■■■■□ 3.13
USP30-209ENST00000536723 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
USP30-209ENST00000536723 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
USP30-209ENST00000536723 GRIN2AQ12879 1464 aa34.47■■■■□ 3.11
USP30-209ENST00000536723 CEP170Q5SW79 1584 aa34.44■■■■□ 3.1
USP30-209ENST00000536723 NUP160Q12769 1436 aa34.4■■■■□ 3.1
USP30-209ENST00000536723 ADAMTS12P58397 1594 aa34.29■■■■□ 3.08
USP30-209ENST00000536723 SHROOM2Q13796 1616 aa34.29■■■■□ 3.08
USP30-209ENST00000536723 KIF13AQ9H1H9 1805 aa34.27■■■■□ 3.08
USP30-209ENST00000536723 FHAD1B1AJZ9 1412 aa34.22■■■■□ 3.07
USP30-209ENST00000536723 WRNQ14191 1432 aaPredicted RBP eCLIP34.22■■■■□ 3.07
USP30-209ENST00000536723 PRG4Q92954 1404 aaPredicted RBP34.18■■■■□ 3.06
USP30-209ENST00000536723 FAM69CQ0P6D2 419 aa34.17■■■■□ 3.06
USP30-209ENST00000536723 JPH4Q96JJ6 628 aa34.12■■■■□ 3.05
USP30-209ENST00000536723 ABCC10Q5T3U5 1492 aa34.1■■■■□ 3.05
USP30-209ENST00000536723 KDM4FA0A1W2PPD8 638 aa34.07■■■■□ 3.04
USP30-209ENST00000536723 NPM1P06748 294 aaKnown RBP eCLIP34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms