RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
CACNB1-205ENST00000536613 CCDC180Q9P1Z9 1646 aa40.54■■■■■ 4.08
CACNB1-205ENST00000536613 ABCC9O60706 1549 aa40.16■■■■■ 4.02
CACNB1-205ENST00000536613 RB1CC1Q8TDY2 1594 aa38.4■■■■□ 3.74
CACNB1-205ENST00000536613 NACADO15069 1562 aa38.26■■■■□ 3.72
CACNB1-205ENST00000536613 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
CACNB1-205ENST00000536613 MYO15BQ96JP2 1530 aa37.89■■■■□ 3.66
CACNB1-205ENST00000536613 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
CACNB1-205ENST00000536613 DCAF1Q9Y4B6 1507 aa37.55■■■■□ 3.6
CACNB1-205ENST00000536613 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
CACNB1-205ENST00000536613 UNC13AQ9UPW8 1703 aa37.44■■■■□ 3.58
CACNB1-205ENST00000536613 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
CACNB1-205ENST00000536613 BICRAQ9NZM4 1560 aa37.26■■■■□ 3.56
CACNB1-205ENST00000536613 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
CACNB1-205ENST00000536613 SHROOM4Q9ULL8 1493 aa36.86■■■■□ 3.49
CACNB1-205ENST00000536613 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
CACNB1-205ENST00000536613 CC2D2AQ9P2K1 1620 aa36.28■■■■□ 3.4
CACNB1-205ENST00000536613 CECR2Q9BXF3 1484 aa36.14■■■■□ 3.38
CACNB1-205ENST00000536613 NCAPD3P42695 1498 aa35.33■■■■□ 3.25
CACNB1-205ENST00000536613 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
CACNB1-205ENST00000536613 ATAD2BQ9ULI0 1458 aa35.27■■■■□ 3.24
CACNB1-205ENST00000536613 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
CACNB1-205ENST00000536613 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
CACNB1-205ENST00000536613 HMGXB3Q12766 1538 aa35.09■■■■□ 3.21
CACNB1-205ENST00000536613 PEG3Q9GZU2 1588 aa35■■■■□ 3.19
CACNB1-205ENST00000536613 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
CACNB1-205ENST00000536613 BAZ1BQ9UIG0 1483 aaKnown RBP34.95■■■■□ 3.19
CACNB1-205ENST00000536613 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
CACNB1-205ENST00000536613 NESP48681 1621 aa34.6■■■■□ 3.13
CACNB1-205ENST00000536613 WIZO95785 1651 aa34.55■■■■□ 3.12
CACNB1-205ENST00000536613 CUX2O14529 1486 aa34.46■■■■□ 3.11
CACNB1-205ENST00000536613 LAMC3Q9Y6N6 1575 aa34.44■■■■□ 3.1
CACNB1-205ENST00000536613 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
CACNB1-205ENST00000536613 CADPSQ9ULU8 1353 aa34.27■■■■□ 3.08
CACNB1-205ENST00000536613 PDS5BQ9NTI5 1447 aa34.25■■■■□ 3.07
CACNB1-205ENST00000536613 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
CACNB1-205ENST00000536613 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
CACNB1-205ENST00000536613 KIF21AQ7Z4S6 1674 aa34.13■■■■□ 3.05
CACNB1-205ENST00000536613 CFTRP13569 1480 aa33.97■■■■□ 3.03
CACNB1-205ENST00000536613 DNAJC5Q9H3Z4 198 aa33.95■■■■□ 3.03
CACNB1-205ENST00000536613 MRC2Q9UBG0 1479 aa33.93■■■■□ 3.02
CACNB1-205ENST00000536613 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
CACNB1-205ENST00000536613 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
CACNB1-205ENST00000536613 WDR62O43379 1518 aa33.83■■■■□ 3.01
CACNB1-205ENST00000536613 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
CACNB1-205ENST00000536613 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
CACNB1-205ENST00000536613 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
CACNB1-205ENST00000536613 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
CACNB1-205ENST00000536613 ABCC8Q09428 1581 aa33.23■■■□□ 2.91
CACNB1-205ENST00000536613 DNMBPQ6XZF7 1577 aa33.19■■■□□ 2.9
CACNB1-205ENST00000536613 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
CACNB1-205ENST00000536613 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
CACNB1-205ENST00000536613 ZNF608Q9ULD9 1512 aaPredicted RBP33.08■■■□□ 2.89
CACNB1-205ENST00000536613 POLA1P09884 1462 aaPredicted RBP32.97■■■□□ 2.87
CACNB1-205ENST00000536613 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
CACNB1-205ENST00000536613 TARBP1Q13395 1621 aaKnown RBP32.94■■■□□ 2.86
CACNB1-205ENST00000536613 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
CACNB1-205ENST00000536613 CUX1P39880 1505 aa32.85■■■□□ 2.85
CACNB1-205ENST00000536613 AQRO60306 1485 aaKnown RBP eCLIP32.83■■■□□ 2.85
CACNB1-205ENST00000536613 RAD54L2Q9Y4B4 1467 aa32.82■■■□□ 2.84
CACNB1-205ENST00000536613 SOGA1O94964 1423 aa32.82■■■□□ 2.84
CACNB1-205ENST00000536613 FGD5Q6ZNL6 1462 aa32.81■■■□□ 2.84
CACNB1-205ENST00000536613 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.82
CACNB1-205ENST00000536613 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
CACNB1-205ENST00000536613 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
CACNB1-205ENST00000536613 CHD1O14646 1710 aa32.53■■■□□ 2.8
CACNB1-205ENST00000536613 FBLN2P98095 1184 aa32.52■■■□□ 2.8
CACNB1-205ENST00000536613 SNAPC4Q5SXM2 1469 aa32.51■■■□□ 2.79
CACNB1-205ENST00000536613 GRIN2BQ13224 1484 aa32.5■■■□□ 2.79
CACNB1-205ENST00000536613 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
CACNB1-205ENST00000536613 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
CACNB1-205ENST00000536613 MAGI1Q96QZ7 1491 aaPredicted RBP32.46■■■□□ 2.79
CACNB1-205ENST00000536613 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
CACNB1-205ENST00000536613 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
CACNB1-205ENST00000536613 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
CACNB1-205ENST00000536613 GAPVD1Q14C86 1478 aa32.43■■■□□ 2.78
CACNB1-205ENST00000536613 TOP2BQ02880 1626 aa32.43■■■□□ 2.78
CACNB1-205ENST00000536613 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
CACNB1-205ENST00000536613 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
CACNB1-205ENST00000536613 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
CACNB1-205ENST00000536613 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
CACNB1-205ENST00000536613 CHMP7Q8WUX9 453 aaPredicted RBP32.37■■■□□ 2.77
CACNB1-205ENST00000536613 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
CACNB1-205ENST00000536613 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
CACNB1-205ENST00000536613 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
CACNB1-205ENST00000536613 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
CACNB1-205ENST00000536613 ARAP1Q96P48 1450 aa32.12■■■□□ 2.73
CACNB1-205ENST00000536613 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
CACNB1-205ENST00000536613 GRIN2AQ12879 1464 aa32.08■■■□□ 2.73
CACNB1-205ENST00000536613 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
CACNB1-205ENST00000536613 FHAD1B1AJZ9 1412 aa32.05■■■□□ 2.72
CACNB1-205ENST00000536613 NUP160Q12769 1436 aa31.97■■■□□ 2.71
CACNB1-205ENST00000536613 CEP170Q5SW79 1584 aa31.93■■■□□ 2.7
CACNB1-205ENST00000536613 KIF27Q86VH2 1401 aa31.83■■■□□ 2.69
CACNB1-205ENST00000536613 IGF1RP08069 1367 aa31.77■■■□□ 2.68
CACNB1-205ENST00000536613 ERCC6L2Q5T890 1561 aa31.75■■■□□ 2.67
CACNB1-205ENST00000536613 SHROOM2Q13796 1616 aa31.75■■■□□ 2.67
CACNB1-205ENST00000536613 CUL7Q14999 1698 aa31.67■■■□□ 2.66
CACNB1-205ENST00000536613 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
CACNB1-205ENST00000536613 TRHP20396 242 aaPredicted RBP31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms