RNA–Protein interactions for RNA: ENST00000536580.5

DDX11-209, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-209ENST00000536580 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
DDX11-209ENST00000536580 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
DDX11-209ENST00000536580 ABCC9O60706 1549 aa33.77■■■■□ 3
DDX11-209ENST00000536580 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
DDX11-209ENST00000536580 NACADO15069 1562 aa32.3■■■□□ 2.76
DDX11-209ENST00000536580 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
DDX11-209ENST00000536580 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
DDX11-209ENST00000536580 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
DDX11-209ENST00000536580 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
DDX11-209ENST00000536580 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
DDX11-209ENST00000536580 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
DDX11-209ENST00000536580 BICRAQ9NZM4 1560 aa31.41■■■□□ 2.62
DDX11-209ENST00000536580 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
DDX11-209ENST00000536580 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
DDX11-209ENST00000536580 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
DDX11-209ENST00000536580 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
DDX11-209ENST00000536580 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
DDX11-209ENST00000536580 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
DDX11-209ENST00000536580 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
DDX11-209ENST00000536580 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
DDX11-209ENST00000536580 NCAPD3P42695 1498 aa29.82■■■□□ 2.36
DDX11-209ENST00000536580 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
DDX11-209ENST00000536580 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
DDX11-209ENST00000536580 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
DDX11-209ENST00000536580 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
DDX11-209ENST00000536580 PEG3Q9GZU2 1588 aa29.61■■■□□ 2.33
DDX11-209ENST00000536580 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
DDX11-209ENST00000536580 WIZO95785 1651 aa29.34■■■□□ 2.29
DDX11-209ENST00000536580 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
DDX11-209ENST00000536580 NESP48681 1621 aa29.17■■■□□ 2.26
DDX11-209ENST00000536580 ERCC6Q03468 1493 aa29.12■■■□□ 2.25
DDX11-209ENST00000536580 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
DDX11-209ENST00000536580 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
DDX11-209ENST00000536580 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
DDX11-209ENST00000536580 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
DDX11-209ENST00000536580 CUX2O14529 1486 aa28.86■■■□□ 2.21
DDX11-209ENST00000536580 KIF21AQ7Z4S6 1674 aa28.79■■■□□ 2.2
DDX11-209ENST00000536580 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
DDX11-209ENST00000536580 CFTRP13569 1480 aa28.72■■■□□ 2.19
DDX11-209ENST00000536580 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
DDX11-209ENST00000536580 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
DDX11-209ENST00000536580 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
DDX11-209ENST00000536580 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
DDX11-209ENST00000536580 WDR62O43379 1518 aa28.48■■■□□ 2.15
DDX11-209ENST00000536580 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
DDX11-209ENST00000536580 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
DDX11-209ENST00000536580 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
DDX11-209ENST00000536580 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
DDX11-209ENST00000536580 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
DDX11-209ENST00000536580 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
DDX11-209ENST00000536580 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
DDX11-209ENST00000536580 IFT140Q96RY7 1462 aa28■■■□□ 2.07
DDX11-209ENST00000536580 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
DDX11-209ENST00000536580 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
DDX11-209ENST00000536580 CUX1P39880 1505 aa27.85■■■□□ 2.05
DDX11-209ENST00000536580 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
DDX11-209ENST00000536580 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
DDX11-209ENST00000536580 SOGA1O94964 1423 aa27.78■■■□□ 2.04
DDX11-209ENST00000536580 RAD54L2Q9Y4B4 1467 aa27.77■■■□□ 2.04
DDX11-209ENST00000536580 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
DDX11-209ENST00000536580 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.034e-9■■■■■ 47.3
DDX11-209ENST00000536580 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
DDX11-209ENST00000536580 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
DDX11-209ENST00000536580 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
DDX11-209ENST00000536580 WDR97A6NE52 1622 aa27.57■■■□□ 2
DDX11-209ENST00000536580 TOP2BQ02880 1626 aa27.55■■■□□ 2
DDX11-209ENST00000536580 SYNJ1O43426 1573 aa27.54■■■□□ 2
DDX11-209ENST00000536580 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
DDX11-209ENST00000536580 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
DDX11-209ENST00000536580 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
DDX11-209ENST00000536580 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
DDX11-209ENST00000536580 FBLN2P98095 1184 aa27.44■■□□□ 1.98
DDX11-209ENST00000536580 CHD1O14646 1710 aa27.44■■□□□ 1.98
DDX11-209ENST00000536580 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
DDX11-209ENST00000536580 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
DDX11-209ENST00000536580 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
DDX11-209ENST00000536580 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
DDX11-209ENST00000536580 CHMP7Q8WUX9 453 aaPredicted RBP27.33■■□□□ 1.97
DDX11-209ENST00000536580 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
DDX11-209ENST00000536580 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
DDX11-209ENST00000536580 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
DDX11-209ENST00000536580 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
DDX11-209ENST00000536580 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
DDX11-209ENST00000536580 ARHGEF11O15085 1522 aa27.2■■□□□ 1.94
DDX11-209ENST00000536580 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
DDX11-209ENST00000536580 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
DDX11-209ENST00000536580 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
DDX11-209ENST00000536580 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
DDX11-209ENST00000536580 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
DDX11-209ENST00000536580 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
DDX11-209ENST00000536580 NUP160Q12769 1436 aa26.99■■□□□ 1.91
DDX11-209ENST00000536580 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
DDX11-209ENST00000536580 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
DDX11-209ENST00000536580 IGF1RP08069 1367 aa26.97■■□□□ 1.91
DDX11-209ENST00000536580 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
DDX11-209ENST00000536580 CUL7Q14999 1698 aa26.87■■□□□ 1.89
DDX11-209ENST00000536580 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
DDX11-209ENST00000536580 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
DDX11-209ENST00000536580 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
DDX11-209ENST00000536580 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms