RNA–Protein interactions for RNA: ENST00000536538.1

NCAPD2-205, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 765 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-205ENST00000536538 NISCHQ9Y2I1 1504 aa57.43■■■■■ 6.78
NCAPD2-205ENST00000536538 CCDC180Q9P1Z9 1646 aa50.87■■■■■ 5.73
NCAPD2-205ENST00000536538 ABCC9O60706 1549 aa49.75■■■■■ 5.56
NCAPD2-205ENST00000536538 DCAF8L2P0C7V8 631 aa48.01■■■■■ 5.28
NCAPD2-205ENST00000536538 ZCCHC6Q5VYS8 1495 aaKnown RBP47.92■■■■■ 5.26
NCAPD2-205ENST00000536538 NACADO15069 1562 aa47.79■■■■■ 5.24
NCAPD2-205ENST00000536538 RB1CC1Q8TDY2 1594 aa47.74■■■■■ 5.23
NCAPD2-205ENST00000536538 MYO15BQ96JP2 1530 aa47.69■■■■■ 5.22
NCAPD2-205ENST00000536538 DCAF1Q9Y4B6 1507 aa47.63■■■■■ 5.22
NCAPD2-205ENST00000536538 DNAJC5BQ9UF47 199 aa46.75■■■■■ 5.07
NCAPD2-205ENST00000536538 UNC13AQ9UPW8 1703 aa46.43■■■■■ 5.02
NCAPD2-205ENST00000536538 SCRIBQ14160 1630 aa46.36■■■■■ 5.01
NCAPD2-205ENST00000536538 PABPN1Q86U42 306 aaKnown RBP eCLIP46.26■■■■■ 5
NCAPD2-205ENST00000536538 BICRAQ9NZM4 1560 aa46.08■■■■■ 4.97
NCAPD2-205ENST00000536538 SHROOM4Q9ULL8 1493 aa45.93■■■■■ 4.94
NCAPD2-205ENST00000536538 CC2D2AQ9P2K1 1620 aa44.99■■■■■ 4.79
NCAPD2-205ENST00000536538 EIF4G1Q04637 1599 aaKnown RBP44.87■■■■■ 4.77
NCAPD2-205ENST00000536538 CECR2Q9BXF3 1484 aa44.8■■■■■ 4.76
NCAPD2-205ENST00000536538 BAZ1AQ9NRL2 1556 aaPredicted RBP44.6■■■■■ 4.73
NCAPD2-205ENST00000536538 SMARCA4P51532 1647 aa44.42■■■■■ 4.7
NCAPD2-205ENST00000536538 SMARCA2P51531 1590 aa44.21■■■■■ 4.67
NCAPD2-205ENST00000536538 MROH2BQ7Z745 1585 aa44.15■■■■■ 4.66
NCAPD2-205ENST00000536538 ATAD2BQ9ULI0 1458 aa44.08■■■■■ 4.65
NCAPD2-205ENST00000536538 NCAPD3P42695 1498 aa44.04■■■■■ 4.64
NCAPD2-205ENST00000536538 PEG3Q9GZU2 1588 aa44■■■■■ 4.63
NCAPD2-205ENST00000536538 RSF1Q96T23 1441 aaPredicted RBP43.92■■■■■ 4.62
NCAPD2-205ENST00000536538 HMGXB3Q12766 1538 aa43.88■■■■■ 4.61
NCAPD2-205ENST00000536538 BAZ1BQ9UIG0 1483 aaKnown RBP43.87■■■■■ 4.61
NCAPD2-205ENST00000536538 WIZO95785 1651 aa43.68■■■■■ 4.58
NCAPD2-205ENST00000536538 TOP2AP11388 1531 aaKnown RBP43.42■■■■■ 4.54
NCAPD2-205ENST00000536538 SUPT5HO00267 1087 aaKnown RBP43.37■■■■■ 4.53
NCAPD2-205ENST00000536538 CUX2O14529 1486 aa42.88■■■■■ 4.46
NCAPD2-205ENST00000536538 ERCC6Q03468 1493 aa42.88■■■■■ 4.46
NCAPD2-205ENST00000536538 DNAJC5Q9H3Z4 198 aa42.87■■■■■ 4.45
NCAPD2-205ENST00000536538 CCDC88BA6NC98 1476 aa42.85■■■■■ 4.45
NCAPD2-205ENST00000536538 CADPSQ9ULU8 1353 aa42.84■■■■■ 4.45
NCAPD2-205ENST00000536538 LAMC3Q9Y6N6 1575 aa42.84■■■■■ 4.45
NCAPD2-205ENST00000536538 NESP48681 1621 aa42.78■■■■■ 4.44
NCAPD2-205ENST00000536538 PDS5BQ9NTI5 1447 aa42.67■■■■■ 4.42
NCAPD2-205ENST00000536538 CFTRP13569 1480 aa42.62■■■■■ 4.41
NCAPD2-205ENST00000536538 THOC2Q8NI27 1593 aaKnown RBP42.4■■■■■ 4.38
NCAPD2-205ENST00000536538 FANCD2Q9BXW9 1451 aa42.3■■■■■ 4.36
NCAPD2-205ENST00000536538 CEP164Q9UPV0 1460 aa42.27■■■■■ 4.36
NCAPD2-205ENST00000536538 KIF21AQ7Z4S6 1674 aa42.27■■■■■ 4.36
NCAPD2-205ENST00000536538 PRDM2Q13029 1718 aa42.26■■■■■ 4.36
NCAPD2-205ENST00000536538 MRC2Q9UBG0 1479 aa42.06■■■■■ 4.32
NCAPD2-205ENST00000536538 ABCC8Q09428 1581 aa41.93■■■■■ 4.3
NCAPD2-205ENST00000536538 WDR62O43379 1518 aa41.81■■■■■ 4.28
NCAPD2-205ENST00000536538 URB2Q14146 1524 aaKnown RBP41.69■■■■■ 4.27
NCAPD2-205ENST00000536538 DNMBPQ6XZF7 1577 aa41.67■■■■■ 4.26
NCAPD2-205ENST00000536538 TOPBP1Q92547 1522 aa41.63■■■■■ 4.25
NCAPD2-205ENST00000536538 WRNQ14191 1432 aaPredicted RBP eCLIP41.54■■■■■ 4.24
NCAPD2-205ENST00000536538 CUX1P39880 1505 aa41.41■■■■■ 4.22
NCAPD2-205ENST00000536538 IFT140Q96RY7 1462 aa41.38■■■■■ 4.21
NCAPD2-205ENST00000536538 TOP2BQ02880 1626 aa41.29■■■■■ 4.2
NCAPD2-205ENST00000536538 POLA1P09884 1462 aaPredicted RBP41.29■■■■■ 4.2
NCAPD2-205ENST00000536538 FGD5Q6ZNL6 1462 aa41.29■■■■■ 4.2
NCAPD2-205ENST00000536538 SOGA1O94964 1423 aa41.27■■■■■ 4.2
NCAPD2-205ENST00000536538 BIVM-ERCC5R4GMW8 1640 aa41.23■■■■■ 4.19
NCAPD2-205ENST00000536538 SYNJ1O43426 1573 aa41.17■■■■■ 4.18
NCAPD2-205ENST00000536538 TRIM41Q8WV44 630 aa41.08■■■■■ 4.17
NCAPD2-205ENST00000536538 RAD54L2Q9Y4B4 1467 aa41.05■■■■■ 4.16
NCAPD2-205ENST00000536538 TARBP1Q13395 1621 aaKnown RBP41.03■■■■■ 4.16
NCAPD2-205ENST00000536538 WDR97A6NE52 1622 aa41.01■■■■■ 4.16
NCAPD2-205ENST00000536538 ABCA10Q8WWZ4 1543 aa40.97■■■■■ 4.15
NCAPD2-205ENST00000536538 ZNF608Q9ULD9 1512 aaPredicted RBP40.88■■■■■ 4.14
NCAPD2-205ENST00000536538 TDRD9Q8NDG6 1382 aaKnown RBP40.87■■■■■ 4.13
NCAPD2-205ENST00000536538 AQRO60306 1485 aaKnown RBP eCLIP40.83■■■■■ 4.134e-6■■■■■ 31
NCAPD2-205ENST00000536538 EIF4G3O43432 1585 aaKnown RBP40.82■■■■■ 4.12
NCAPD2-205ENST00000536538 OSCARQ8IYS5 282 aa40.8■■■■■ 4.12
NCAPD2-205ENST00000536538 GAPVD1Q14C86 1478 aa40.78■■■■■ 4.12
NCAPD2-205ENST00000536538 GRIN2BQ13224 1484 aa40.74■■■■■ 4.11
NCAPD2-205ENST00000536538 KIF27Q86VH2 1401 aa40.74■■■■■ 4.11
NCAPD2-205ENST00000536538 CHIC1Q5VXU3 224 aa40.69■■■■■ 4.1
NCAPD2-205ENST00000536538 ABCA5Q8WWZ7 1642 aa40.63■■■■■ 4.09
NCAPD2-205ENST00000536538 MAGI1Q96QZ7 1491 aaPredicted RBP40.58■■■■■ 4.09
NCAPD2-205ENST00000536538 ERICH3Q5RHP9 1530 aa40.53■■■■■ 4.08
NCAPD2-205ENST00000536538 PBRM1Q86U86 1689 aa40.5■■■■■ 4.07
NCAPD2-205ENST00000536538 SNAPC4Q5SXM2 1469 aa40.5■■■■■ 4.07
NCAPD2-205ENST00000536538 CHMP7Q8WUX9 453 aaPredicted RBP40.49■■■■■ 4.07
NCAPD2-205ENST00000536538 FBLN2P98095 1184 aa40.48■■■■■ 4.07
NCAPD2-205ENST00000536538 RIMBP3CA6NJZ7 1639 aa40.46■■■■■ 4.07
NCAPD2-205ENST00000536538 RIMBP3BA6NNM3 1639 aa40.46■■■■■ 4.07
NCAPD2-205ENST00000536538 RIMBP3Q9UFD9 1639 aa40.46■■■■■ 4.07
NCAPD2-205ENST00000536538 EEA1Q15075 1411 aa40.39■■■■■ 4.06
NCAPD2-205ENST00000536538 SYNJ2O15056 1496 aa40.39■■■■■ 4.06
NCAPD2-205ENST00000536538 FHAD1B1AJZ9 1412 aa40.38■■■■■ 4.05
NCAPD2-205ENST00000536538 IGF1RP08069 1367 aa40.33■■■■■ 4.05
NCAPD2-205ENST00000536538 CHD1O14646 1710 aa40.32■■■■■ 4.05
NCAPD2-205ENST00000536538 ARHGEF11O15085 1522 aa40.3■■■■■ 4.04
NCAPD2-205ENST00000536538 CUL7Q14999 1698 aa40.27■■■■■ 4.04
NCAPD2-205ENST00000536538 ADAMTS12P58397 1594 aa40.25■■■■■ 4.03
NCAPD2-205ENST00000536538 CARMIL1Q5VZK9 1371 aa40.22■■■■■ 4.03
NCAPD2-205ENST00000536538 CSRNP3Q8WYN3 585 aa40.16■■■■■ 4.02
NCAPD2-205ENST00000536538 GRIN2AQ12879 1464 aa40.13■■■■■ 4.02
NCAPD2-205ENST00000536538 RUSC2Q8N2Y8 1516 aa40.12■■■■■ 4.01
NCAPD2-205ENST00000536538 FAM9AQ8IZU1 332 aaPredicted RBP40.04■■■■■ 4
NCAPD2-205ENST00000536538 RAPGEF2Q9Y4G8 1499 aa40.03■■■■■ 4
NCAPD2-205ENST00000536538 ARAP1Q96P48 1450 aa39.93■■■■□ 3.98
NCAPD2-205ENST00000536538 NUP160Q12769 1436 aa39.91■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms