RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
SCNN1A-209ENST00000536411 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
SCNN1A-209ENST00000536411 ABCC9O60706 1549 aa30.37■■■□□ 2.45
SCNN1A-209ENST00000536411 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
SCNN1A-209ENST00000536411 NACADO15069 1562 aa29.26■■■□□ 2.27
SCNN1A-209ENST00000536411 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
SCNN1A-209ENST00000536411 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
SCNN1A-209ENST00000536411 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
SCNN1A-209ENST00000536411 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
SCNN1A-209ENST00000536411 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
SCNN1A-209ENST00000536411 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
SCNN1A-209ENST00000536411 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
SCNN1A-209ENST00000536411 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SCNN1A-209ENST00000536411 SCRIBQ14160 1630 aa28.14■■■□□ 2.1
SCNN1A-209ENST00000536411 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
SCNN1A-209ENST00000536411 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
SCNN1A-209ENST00000536411 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
SCNN1A-209ENST00000536411 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
SCNN1A-209ENST00000536411 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
SCNN1A-209ENST00000536411 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
SCNN1A-209ENST00000536411 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
SCNN1A-209ENST00000536411 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
SCNN1A-209ENST00000536411 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
SCNN1A-209ENST00000536411 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
SCNN1A-209ENST00000536411 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
SCNN1A-209ENST00000536411 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
SCNN1A-209ENST00000536411 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.86
SCNN1A-209ENST00000536411 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
SCNN1A-209ENST00000536411 WIZO95785 1651 aa26.33■■□□□ 1.81
SCNN1A-209ENST00000536411 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
SCNN1A-209ENST00000536411 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
SCNN1A-209ENST00000536411 CUX2O14529 1486 aa26.19■■□□□ 1.78
SCNN1A-209ENST00000536411 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
SCNN1A-209ENST00000536411 NESP48681 1621 aa26.16■■□□□ 1.78
SCNN1A-209ENST00000536411 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
SCNN1A-209ENST00000536411 CADPSQ9ULU8 1353 aa26.13■■□□□ 1.77
SCNN1A-209ENST00000536411 CFTRP13569 1480 aa25.93■■□□□ 1.74
SCNN1A-209ENST00000536411 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
SCNN1A-209ENST00000536411 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
SCNN1A-209ENST00000536411 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
SCNN1A-209ENST00000536411 MRC2Q9UBG0 1479 aa25.84■■□□□ 1.73
SCNN1A-209ENST00000536411 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
SCNN1A-209ENST00000536411 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
SCNN1A-209ENST00000536411 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
SCNN1A-209ENST00000536411 WDR62O43379 1518 aa25.75■■□□□ 1.71
SCNN1A-209ENST00000536411 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
SCNN1A-209ENST00000536411 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
SCNN1A-209ENST00000536411 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
SCNN1A-209ENST00000536411 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SCNN1A-209ENST00000536411 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
SCNN1A-209ENST00000536411 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
SCNN1A-209ENST00000536411 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
SCNN1A-209ENST00000536411 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
SCNN1A-209ENST00000536411 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
SCNN1A-209ENST00000536411 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
SCNN1A-209ENST00000536411 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
SCNN1A-209ENST00000536411 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
SCNN1A-209ENST00000536411 SOGA1O94964 1423 aa25.03■■□□□ 1.6
SCNN1A-209ENST00000536411 CUX1P39880 1505 aa25.03■■□□□ 1.6
SCNN1A-209ENST00000536411 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
SCNN1A-209ENST00000536411 OSCARQ8IYS5 282 aa25■■□□□ 1.59
SCNN1A-209ENST00000536411 RAD54L2Q9Y4B4 1467 aa24.92■■□□□ 1.58
SCNN1A-209ENST00000536411 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.584e-8■■■■■ 31.9
SCNN1A-209ENST00000536411 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
SCNN1A-209ENST00000536411 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
SCNN1A-209ENST00000536411 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
SCNN1A-209ENST00000536411 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
SCNN1A-209ENST00000536411 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
SCNN1A-209ENST00000536411 GRIN2BQ13224 1484 aa24.83■■□□□ 1.56
SCNN1A-209ENST00000536411 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
SCNN1A-209ENST00000536411 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
SCNN1A-209ENST00000536411 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
SCNN1A-209ENST00000536411 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
SCNN1A-209ENST00000536411 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
SCNN1A-209ENST00000536411 CHD1O14646 1710 aa24.71■■□□□ 1.55
SCNN1A-209ENST00000536411 FBLN2P98095 1184 aa24.69■■□□□ 1.54
SCNN1A-209ENST00000536411 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
SCNN1A-209ENST00000536411 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
SCNN1A-209ENST00000536411 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
SCNN1A-209ENST00000536411 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
SCNN1A-209ENST00000536411 ARHGEF11O15085 1522 aa24.55■■□□□ 1.52
SCNN1A-209ENST00000536411 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
SCNN1A-209ENST00000536411 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
SCNN1A-209ENST00000536411 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
SCNN1A-209ENST00000536411 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
SCNN1A-209ENST00000536411 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
SCNN1A-209ENST00000536411 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
SCNN1A-209ENST00000536411 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
SCNN1A-209ENST00000536411 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
SCNN1A-209ENST00000536411 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
SCNN1A-209ENST00000536411 NUP160Q12769 1436 aa24.37■■□□□ 1.49
SCNN1A-209ENST00000536411 CUL7Q14999 1698 aa24.33■■□□□ 1.49
SCNN1A-209ENST00000536411 ARAP1Q96P48 1450 aa24.29■■□□□ 1.48
SCNN1A-209ENST00000536411 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
SCNN1A-209ENST00000536411 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
SCNN1A-209ENST00000536411 IGF1RP08069 1367 aa24.25■■□□□ 1.47
SCNN1A-209ENST00000536411 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
SCNN1A-209ENST00000536411 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
SCNN1A-209ENST00000536411 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
SCNN1A-209ENST00000536411 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms