RNA–Protein interactions for RNA: ENST00000536408.2

TCHP-203, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-203ENST00000536408 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
TCHP-203ENST00000536408 ABCC9O60706 1549 aa20.23■□□□□ 0.83
TCHP-203ENST00000536408 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
TCHP-203ENST00000536408 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
TCHP-203ENST00000536408 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
TCHP-203ENST00000536408 NACADO15069 1562 aa19.06■□□□□ 0.64
TCHP-203ENST00000536408 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
TCHP-203ENST00000536408 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
TCHP-203ENST00000536408 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
TCHP-203ENST00000536408 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
TCHP-203ENST00000536408 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
TCHP-203ENST00000536408 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
TCHP-203ENST00000536408 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
TCHP-203ENST00000536408 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
TCHP-203ENST00000536408 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
TCHP-203ENST00000536408 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
TCHP-203ENST00000536408 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
TCHP-203ENST00000536408 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
TCHP-203ENST00000536408 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
TCHP-203ENST00000536408 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
TCHP-203ENST00000536408 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
TCHP-203ENST00000536408 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
TCHP-203ENST00000536408 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
TCHP-203ENST00000536408 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
TCHP-203ENST00000536408 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
TCHP-203ENST00000536408 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
TCHP-203ENST00000536408 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
TCHP-203ENST00000536408 NESP48681 1621 aa17.39■□□□□ 0.38
TCHP-203ENST00000536408 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
TCHP-203ENST00000536408 CUX2O14529 1486 aa17.28■□□□□ 0.36
TCHP-203ENST00000536408 WIZO95785 1651 aa17.24■□□□□ 0.35
TCHP-203ENST00000536408 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
TCHP-203ENST00000536408 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
TCHP-203ENST00000536408 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
TCHP-203ENST00000536408 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
TCHP-203ENST00000536408 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
TCHP-203ENST00000536408 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
TCHP-203ENST00000536408 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
TCHP-203ENST00000536408 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
TCHP-203ENST00000536408 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
TCHP-203ENST00000536408 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
TCHP-203ENST00000536408 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
TCHP-203ENST00000536408 CFTRP13569 1480 aa16.92■□□□□ 0.3
TCHP-203ENST00000536408 WDR62O43379 1518 aa16.91■□□□□ 0.3
TCHP-203ENST00000536408 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
TCHP-203ENST00000536408 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
TCHP-203ENST00000536408 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
TCHP-203ENST00000536408 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
TCHP-203ENST00000536408 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
TCHP-203ENST00000536408 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
TCHP-203ENST00000536408 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
TCHP-203ENST00000536408 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
TCHP-203ENST00000536408 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
TCHP-203ENST00000536408 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
TCHP-203ENST00000536408 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
TCHP-203ENST00000536408 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.234e-6■■■■■ 31
TCHP-203ENST00000536408 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
TCHP-203ENST00000536408 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
TCHP-203ENST00000536408 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
TCHP-203ENST00000536408 FBLN2P98095 1184 aa16.44■□□□□ 0.22
TCHP-203ENST00000536408 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
TCHP-203ENST00000536408 SOGA1O94964 1423 aa16.41■□□□□ 0.22
TCHP-203ENST00000536408 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
TCHP-203ENST00000536408 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
TCHP-203ENST00000536408 CUX1P39880 1505 aa16.39■□□□□ 0.21
TCHP-203ENST00000536408 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
TCHP-203ENST00000536408 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
TCHP-203ENST00000536408 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
TCHP-203ENST00000536408 CHD1O14646 1710 aa16.33■□□□□ 0.21
TCHP-203ENST00000536408 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
TCHP-203ENST00000536408 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
TCHP-203ENST00000536408 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
TCHP-203ENST00000536408 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
TCHP-203ENST00000536408 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
TCHP-203ENST00000536408 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
TCHP-203ENST00000536408 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
TCHP-203ENST00000536408 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
TCHP-203ENST00000536408 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
TCHP-203ENST00000536408 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
TCHP-203ENST00000536408 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
TCHP-203ENST00000536408 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
TCHP-203ENST00000536408 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
TCHP-203ENST00000536408 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
TCHP-203ENST00000536408 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
TCHP-203ENST00000536408 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
TCHP-203ENST00000536408 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
TCHP-203ENST00000536408 TOP2BQ02880 1626 aa16.1■□□□□ 0.17
TCHP-203ENST00000536408 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
TCHP-203ENST00000536408 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
TCHP-203ENST00000536408 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
TCHP-203ENST00000536408 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
TCHP-203ENST00000536408 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
TCHP-203ENST00000536408 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
TCHP-203ENST00000536408 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
TCHP-203ENST00000536408 ERICH3Q5RHP9 1530 aa15.95■□□□□ 0.14
TCHP-203ENST00000536408 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
TCHP-203ENST00000536408 NUP160Q12769 1436 aa15.94■□□□□ 0.14
TCHP-203ENST00000536408 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
TCHP-203ENST00000536408 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
TCHP-203ENST00000536408 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms