RNA–Protein interactions for RNA: ENST00000536170.1

ARHGEF17-202, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 2

Gene ARHGEF17, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-202ENST00000536170 NISCHQ9Y2I1 1504 aa46.94■■■■■ 5.1
ARHGEF17-202ENST00000536170 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
ARHGEF17-202ENST00000536170 ABCC9O60706 1549 aa41.45■■■■■ 4.23
ARHGEF17-202ENST00000536170 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
ARHGEF17-202ENST00000536170 NACADO15069 1562 aa39.57■■■■□ 3.92
ARHGEF17-202ENST00000536170 DCAF8L2P0C7V8 631 aa39.3■■■■□ 3.88
ARHGEF17-202ENST00000536170 MYO15BQ96JP2 1530 aa39.2■■■■□ 3.87
ARHGEF17-202ENST00000536170 ZCCHC6Q5VYS8 1495 aaKnown RBP39.02■■■■□ 3.84
ARHGEF17-202ENST00000536170 DCAF1Q9Y4B6 1507 aa38.85■■■■□ 3.81
ARHGEF17-202ENST00000536170 UNC13AQ9UPW8 1703 aa38.8■■■■□ 3.8
ARHGEF17-202ENST00000536170 PABPN1Q86U42 306 aaKnown RBP eCLIP38.6■■■■□ 3.77
ARHGEF17-202ENST00000536170 BICRAQ9NZM4 1560 aa38.52■■■■□ 3.76
ARHGEF17-202ENST00000536170 DNAJC5BQ9UF47 199 aa38.41■■■■□ 3.74
ARHGEF17-202ENST00000536170 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
ARHGEF17-202ENST00000536170 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
ARHGEF17-202ENST00000536170 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
ARHGEF17-202ENST00000536170 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
ARHGEF17-202ENST00000536170 CECR2Q9BXF3 1484 aa37.32■■■■□ 3.56
ARHGEF17-202ENST00000536170 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
ARHGEF17-202ENST00000536170 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
ARHGEF17-202ENST00000536170 ATAD2BQ9ULI0 1458 aa36.44■■■■□ 3.42
ARHGEF17-202ENST00000536170 BAZ1AQ9NRL2 1556 aaPredicted RBP36.43■■■■□ 3.42
ARHGEF17-202ENST00000536170 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
ARHGEF17-202ENST00000536170 HMGXB3Q12766 1538 aa36.31■■■■□ 3.4
ARHGEF17-202ENST00000536170 PEG3Q9GZU2 1588 aa36.21■■■■□ 3.39
ARHGEF17-202ENST00000536170 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
ARHGEF17-202ENST00000536170 BAZ1BQ9UIG0 1483 aaKnown RBP36.12■■■■□ 3.37
ARHGEF17-202ENST00000536170 ERCC6Q03468 1493 aa35.79■■■■□ 3.32
ARHGEF17-202ENST00000536170 WIZO95785 1651 aa35.73■■■■□ 3.31
ARHGEF17-202ENST00000536170 NESP48681 1621 aa35.72■■■■□ 3.31
ARHGEF17-202ENST00000536170 LAMC3Q9Y6N6 1575 aa35.64■■■■□ 3.3
ARHGEF17-202ENST00000536170 CUX2O14529 1486 aa35.61■■■■□ 3.29
ARHGEF17-202ENST00000536170 RSF1Q96T23 1441 aaPredicted RBP35.56■■■■□ 3.28
ARHGEF17-202ENST00000536170 CADPSQ9ULU8 1353 aa35.39■■■■□ 3.26
ARHGEF17-202ENST00000536170 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
ARHGEF17-202ENST00000536170 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
ARHGEF17-202ENST00000536170 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
ARHGEF17-202ENST00000536170 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
ARHGEF17-202ENST00000536170 CFTRP13569 1480 aa35.1■■■■□ 3.21
ARHGEF17-202ENST00000536170 MRC2Q9UBG0 1479 aa35.06■■■■□ 3.2
ARHGEF17-202ENST00000536170 DNAJC5Q9H3Z4 198 aa35.01■■■■□ 3.2
ARHGEF17-202ENST00000536170 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.19
ARHGEF17-202ENST00000536170 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
ARHGEF17-202ENST00000536170 WDR62O43379 1518 aa34.98■■■■□ 3.19
ARHGEF17-202ENST00000536170 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
ARHGEF17-202ENST00000536170 PRDM2Q13029 1718 aa34.84■■■■□ 3.17
ARHGEF17-202ENST00000536170 URB2Q14146 1524 aaKnown RBP34.66■■■■□ 3.14
ARHGEF17-202ENST00000536170 TOPBP1Q92547 1522 aa34.39■■■■□ 3.1
ARHGEF17-202ENST00000536170 ABCC8Q09428 1581 aa34.38■■■■□ 3.09
ARHGEF17-202ENST00000536170 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.09
ARHGEF17-202ENST00000536170 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
ARHGEF17-202ENST00000536170 SUPT5HO00267 1087 aaKnown RBP34.22■■■■□ 3.07
ARHGEF17-202ENST00000536170 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
ARHGEF17-202ENST00000536170 TARBP1Q13395 1621 aaKnown RBP34.06■■■■□ 3.04
ARHGEF17-202ENST00000536170 POLA1P09884 1462 aaPredicted RBP34.06■■■■□ 3.04
ARHGEF17-202ENST00000536170 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
ARHGEF17-202ENST00000536170 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
ARHGEF17-202ENST00000536170 CUX1P39880 1505 aa33.94■■■■□ 3.02
ARHGEF17-202ENST00000536170 FGD5Q6ZNL6 1462 aa33.9■■■■□ 3.02
ARHGEF17-202ENST00000536170 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.01
ARHGEF17-202ENST00000536170 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
ARHGEF17-202ENST00000536170 SOGA1O94964 1423 aa33.88■■■■□ 3.01
ARHGEF17-202ENST00000536170 WDR97A6NE52 1622 aa33.82■■■■□ 3
ARHGEF17-202ENST00000536170 TDRD9Q8NDG6 1382 aaKnown RBP33.73■■■□□ 2.99
ARHGEF17-202ENST00000536170 CHD1O14646 1710 aa33.68■■■□□ 2.98
ARHGEF17-202ENST00000536170 TRIM41Q8WV44 630 aa33.62■■■□□ 2.97
ARHGEF17-202ENST00000536170 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
ARHGEF17-202ENST00000536170 GRIN2BQ13224 1484 aa33.58■■■□□ 2.97
ARHGEF17-202ENST00000536170 ABCA10Q8WWZ4 1543 aa33.58■■■□□ 2.97
ARHGEF17-202ENST00000536170 BIVM-ERCC5R4GMW8 1640 aa33.56■■■□□ 2.96
ARHGEF17-202ENST00000536170 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
ARHGEF17-202ENST00000536170 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
ARHGEF17-202ENST00000536170 TOP2BQ02880 1626 aa33.55■■■□□ 2.96
ARHGEF17-202ENST00000536170 FBLN2P98095 1184 aa33.54■■■□□ 2.96
ARHGEF17-202ENST00000536170 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
ARHGEF17-202ENST00000536170 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
ARHGEF17-202ENST00000536170 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
ARHGEF17-202ENST00000536170 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
ARHGEF17-202ENST00000536170 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
ARHGEF17-202ENST00000536170 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
ARHGEF17-202ENST00000536170 PBRM1Q86U86 1689 aa33.49■■■□□ 2.95
ARHGEF17-202ENST00000536170 ARHGEF11O15085 1522 aa33.48■■■□□ 2.95
ARHGEF17-202ENST00000536170 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
ARHGEF17-202ENST00000536170 CHMP7Q8WUX9 453 aaPredicted RBP33.4■■■□□ 2.94
ARHGEF17-202ENST00000536170 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
ARHGEF17-202ENST00000536170 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
ARHGEF17-202ENST00000536170 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
ARHGEF17-202ENST00000536170 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
ARHGEF17-202ENST00000536170 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
ARHGEF17-202ENST00000536170 CYB5RLQ6IPT4 315 aa33.13■■■□□ 2.89
ARHGEF17-202ENST00000536170 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
ARHGEF17-202ENST00000536170 NUP160Q12769 1436 aa33.02■■■□□ 2.88
ARHGEF17-202ENST00000536170 CEP170Q5SW79 1584 aa33■■■□□ 2.87
ARHGEF17-202ENST00000536170 KIF27Q86VH2 1401 aa32.89■■■□□ 2.86
ARHGEF17-202ENST00000536170 SHROOM2Q13796 1616 aa32.84■■■□□ 2.85
ARHGEF17-202ENST00000536170 CUL7Q14999 1698 aa32.79■■■□□ 2.84
ARHGEF17-202ENST00000536170 IGF1RP08069 1367 aa32.79■■■□□ 2.84
ARHGEF17-202ENST00000536170 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
ARHGEF17-202ENST00000536170 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
ARHGEF17-202ENST00000536170 PRG4Q92954 1404 aaPredicted RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms