RNA–Protein interactions for RNA: ENST00000536090.1

NCAPD2-204, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 2

Gene NCAPD2, Length 654 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-204ENST00000536090 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
NCAPD2-204ENST00000536090 ABCC9O60706 1549 aa25.61■■□□□ 1.69
NCAPD2-204ENST00000536090 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
NCAPD2-204ENST00000536090 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
NCAPD2-204ENST00000536090 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
NCAPD2-204ENST00000536090 NACADO15069 1562 aa23.83■■□□□ 1.41
NCAPD2-204ENST00000536090 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
NCAPD2-204ENST00000536090 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
NCAPD2-204ENST00000536090 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
NCAPD2-204ENST00000536090 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
NCAPD2-204ENST00000536090 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
NCAPD2-204ENST00000536090 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
NCAPD2-204ENST00000536090 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
NCAPD2-204ENST00000536090 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
NCAPD2-204ENST00000536090 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
NCAPD2-204ENST00000536090 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
NCAPD2-204ENST00000536090 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
NCAPD2-204ENST00000536090 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
NCAPD2-204ENST00000536090 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
NCAPD2-204ENST00000536090 CUX2O14529 1486 aa22.27■■□□□ 1.16
NCAPD2-204ENST00000536090 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
NCAPD2-204ENST00000536090 NCAPD3P42695 1498 aa22■■□□□ 1.11
NCAPD2-204ENST00000536090 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
NCAPD2-204ENST00000536090 NESP48681 1621 aa21.87■■□□□ 1.09
NCAPD2-204ENST00000536090 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
NCAPD2-204ENST00000536090 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
NCAPD2-204ENST00000536090 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
NCAPD2-204ENST00000536090 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
NCAPD2-204ENST00000536090 THOC2Q8NI27 1593 aaKnown RBP21.77■■□□□ 1.08
NCAPD2-204ENST00000536090 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
NCAPD2-204ENST00000536090 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
NCAPD2-204ENST00000536090 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
NCAPD2-204ENST00000536090 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
NCAPD2-204ENST00000536090 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
NCAPD2-204ENST00000536090 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
NCAPD2-204ENST00000536090 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
NCAPD2-204ENST00000536090 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
NCAPD2-204ENST00000536090 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
NCAPD2-204ENST00000536090 WIZO95785 1651 aa21.36■■□□□ 1.01
NCAPD2-204ENST00000536090 WDR62O43379 1518 aa21.33■■□□□ 1
NCAPD2-204ENST00000536090 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
NCAPD2-204ENST00000536090 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
NCAPD2-204ENST00000536090 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
NCAPD2-204ENST00000536090 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
NCAPD2-204ENST00000536090 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
NCAPD2-204ENST00000536090 CFTRP13569 1480 aa20.98■□□□□ 0.95
NCAPD2-204ENST00000536090 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
NCAPD2-204ENST00000536090 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
NCAPD2-204ENST00000536090 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
NCAPD2-204ENST00000536090 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
NCAPD2-204ENST00000536090 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
NCAPD2-204ENST00000536090 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
NCAPD2-204ENST00000536090 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
NCAPD2-204ENST00000536090 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
NCAPD2-204ENST00000536090 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
NCAPD2-204ENST00000536090 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
NCAPD2-204ENST00000536090 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
NCAPD2-204ENST00000536090 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
NCAPD2-204ENST00000536090 TOPBP1Q92547 1522 aa20.64■□□□□ 0.9
NCAPD2-204ENST00000536090 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
NCAPD2-204ENST00000536090 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
NCAPD2-204ENST00000536090 CHD1O14646 1710 aa20.6■□□□□ 0.89
NCAPD2-204ENST00000536090 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
NCAPD2-204ENST00000536090 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
NCAPD2-204ENST00000536090 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
NCAPD2-204ENST00000536090 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
NCAPD2-204ENST00000536090 FBLN2P98095 1184 aa20.45■□□□□ 0.86
NCAPD2-204ENST00000536090 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
NCAPD2-204ENST00000536090 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
NCAPD2-204ENST00000536090 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
NCAPD2-204ENST00000536090 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
NCAPD2-204ENST00000536090 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
NCAPD2-204ENST00000536090 CUX1P39880 1505 aa20.31■□□□□ 0.84
NCAPD2-204ENST00000536090 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
NCAPD2-204ENST00000536090 SOGA1O94964 1423 aa20.27■□□□□ 0.83
NCAPD2-204ENST00000536090 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
NCAPD2-204ENST00000536090 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
NCAPD2-204ENST00000536090 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
NCAPD2-204ENST00000536090 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
NCAPD2-204ENST00000536090 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
NCAPD2-204ENST00000536090 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
NCAPD2-204ENST00000536090 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
NCAPD2-204ENST00000536090 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
NCAPD2-204ENST00000536090 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
NCAPD2-204ENST00000536090 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
NCAPD2-204ENST00000536090 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
NCAPD2-204ENST00000536090 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
NCAPD2-204ENST00000536090 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
NCAPD2-204ENST00000536090 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
NCAPD2-204ENST00000536090 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
NCAPD2-204ENST00000536090 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
NCAPD2-204ENST00000536090 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
NCAPD2-204ENST00000536090 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
NCAPD2-204ENST00000536090 NUP160Q12769 1436 aa19.87■□□□□ 0.77
NCAPD2-204ENST00000536090 KIF13AQ9H1H9 1805 aa19.87■□□□□ 0.77
NCAPD2-204ENST00000536090 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
NCAPD2-204ENST00000536090 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
NCAPD2-204ENST00000536090 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
NCAPD2-204ENST00000536090 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
NCAPD2-204ENST00000536090 IGF1RP08069 1367 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms