RNA–Protein interactions for RNA: ENST00000536036.1

KDM2B-204, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-204ENST00000536036 NISCHQ9Y2I1 1504 aa30■■■□□ 2.39
KDM2B-204ENST00000536036 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
KDM2B-204ENST00000536036 ABCC9O60706 1549 aa25.56■■□□□ 1.68
KDM2B-204ENST00000536036 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
KDM2B-204ENST00000536036 NACADO15069 1562 aa24.92■■□□□ 1.58
KDM2B-204ENST00000536036 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
KDM2B-204ENST00000536036 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
KDM2B-204ENST00000536036 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
KDM2B-204ENST00000536036 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
KDM2B-204ENST00000536036 UNC13AQ9UPW8 1703 aa24.41■■□□□ 1.5
KDM2B-204ENST00000536036 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
KDM2B-204ENST00000536036 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
KDM2B-204ENST00000536036 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
KDM2B-204ENST00000536036 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
KDM2B-204ENST00000536036 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
KDM2B-204ENST00000536036 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
KDM2B-204ENST00000536036 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
KDM2B-204ENST00000536036 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
KDM2B-204ENST00000536036 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
KDM2B-204ENST00000536036 MROH2BQ7Z745 1585 aa23.09■■□□□ 1.29
KDM2B-204ENST00000536036 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
KDM2B-204ENST00000536036 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
KDM2B-204ENST00000536036 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
KDM2B-204ENST00000536036 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
KDM2B-204ENST00000536036 WIZO95785 1651 aa22.93■■□□□ 1.26
KDM2B-204ENST00000536036 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
KDM2B-204ENST00000536036 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
KDM2B-204ENST00000536036 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
KDM2B-204ENST00000536036 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
KDM2B-204ENST00000536036 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
KDM2B-204ENST00000536036 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
KDM2B-204ENST00000536036 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
KDM2B-204ENST00000536036 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
KDM2B-204ENST00000536036 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
KDM2B-204ENST00000536036 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
KDM2B-204ENST00000536036 CFTRP13569 1480 aa22.2■■□□□ 1.14
KDM2B-204ENST00000536036 NESP48681 1621 aa22.2■■□□□ 1.14
KDM2B-204ENST00000536036 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
KDM2B-204ENST00000536036 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
KDM2B-204ENST00000536036 ERCC6Q03468 1493 aa22.08■■□□□ 1.12
KDM2B-204ENST00000536036 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
KDM2B-204ENST00000536036 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
KDM2B-204ENST00000536036 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
KDM2B-204ENST00000536036 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
KDM2B-204ENST00000536036 WDR62O43379 1518 aa21.81■■□□□ 1.08
KDM2B-204ENST00000536036 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
KDM2B-204ENST00000536036 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
KDM2B-204ENST00000536036 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
KDM2B-204ENST00000536036 CUX2O14529 1486 aa21.72■■□□□ 1.07
KDM2B-204ENST00000536036 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
KDM2B-204ENST00000536036 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
KDM2B-204ENST00000536036 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
KDM2B-204ENST00000536036 CUX1P39880 1505 aa21.66■■□□□ 1.06
KDM2B-204ENST00000536036 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
KDM2B-204ENST00000536036 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
KDM2B-204ENST00000536036 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
KDM2B-204ENST00000536036 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
KDM2B-204ENST00000536036 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
KDM2B-204ENST00000536036 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
KDM2B-204ENST00000536036 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
KDM2B-204ENST00000536036 SOGA1O94964 1423 aa21.43■■□□□ 1.02
KDM2B-204ENST00000536036 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
KDM2B-204ENST00000536036 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
KDM2B-204ENST00000536036 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
KDM2B-204ENST00000536036 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
KDM2B-204ENST00000536036 PBRM1Q86U86 1689 aa21.31■■□□□ 1
KDM2B-204ENST00000536036 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
KDM2B-204ENST00000536036 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
KDM2B-204ENST00000536036 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
KDM2B-204ENST00000536036 GAPVD1Q14C86 1478 aa21.23■□□□□ 0.99
KDM2B-204ENST00000536036 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
KDM2B-204ENST00000536036 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
KDM2B-204ENST00000536036 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■□ 21.5
KDM2B-204ENST00000536036 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
KDM2B-204ENST00000536036 ERICH3Q5RHP9 1530 aa21.16■□□□□ 0.98
KDM2B-204ENST00000536036 CUL7Q14999 1698 aa21.13■□□□□ 0.97
KDM2B-204ENST00000536036 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
KDM2B-204ENST00000536036 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
KDM2B-204ENST00000536036 EEA1Q15075 1411 aa21.09■□□□□ 0.97
KDM2B-204ENST00000536036 CHD1O14646 1710 aa21.09■□□□□ 0.97
KDM2B-204ENST00000536036 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
KDM2B-204ENST00000536036 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
KDM2B-204ENST00000536036 RUSC2Q8N2Y8 1516 aa21■□□□□ 0.95
KDM2B-204ENST00000536036 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
KDM2B-204ENST00000536036 IGF1RP08069 1367 aa20.96■□□□□ 0.95
KDM2B-204ENST00000536036 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
KDM2B-204ENST00000536036 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
KDM2B-204ENST00000536036 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
KDM2B-204ENST00000536036 FBLN2P98095 1184 aa20.89■□□□□ 0.93
KDM2B-204ENST00000536036 KIF21BO75037 1637 aa20.87■□□□□ 0.93
KDM2B-204ENST00000536036 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
KDM2B-204ENST00000536036 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
KDM2B-204ENST00000536036 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
KDM2B-204ENST00000536036 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
KDM2B-204ENST00000536036 CTTNBP2Q8WZ74 1663 aa20.83■□□□□ 0.93
KDM2B-204ENST00000536036 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
KDM2B-204ENST00000536036 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
KDM2B-204ENST00000536036 NUP160Q12769 1436 aa20.78■□□□□ 0.92
KDM2B-204ENST00000536036 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
KDM2B-204ENST00000536036 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms