RNA–Protein interactions for RNA: ENST00000536013.5

PTPN6-207, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 602 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-207ENST00000536013 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
PTPN6-207ENST00000536013 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
PTPN6-207ENST00000536013 ABCC9O60706 1549 aa27.41■■□□□ 1.98
PTPN6-207ENST00000536013 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
PTPN6-207ENST00000536013 NACADO15069 1562 aa26.41■■□□□ 1.82
PTPN6-207ENST00000536013 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
PTPN6-207ENST00000536013 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
PTPN6-207ENST00000536013 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
PTPN6-207ENST00000536013 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
PTPN6-207ENST00000536013 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
PTPN6-207ENST00000536013 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
PTPN6-207ENST00000536013 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
PTPN6-207ENST00000536013 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
PTPN6-207ENST00000536013 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
PTPN6-207ENST00000536013 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
PTPN6-207ENST00000536013 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
PTPN6-207ENST00000536013 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.56
PTPN6-207ENST00000536013 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
PTPN6-207ENST00000536013 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
PTPN6-207ENST00000536013 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
PTPN6-207ENST00000536013 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
PTPN6-207ENST00000536013 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
PTPN6-207ENST00000536013 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
PTPN6-207ENST00000536013 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
PTPN6-207ENST00000536013 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
PTPN6-207ENST00000536013 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
PTPN6-207ENST00000536013 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
PTPN6-207ENST00000536013 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
PTPN6-207ENST00000536013 WIZO95785 1651 aa24.04■■□□□ 1.44
PTPN6-207ENST00000536013 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
PTPN6-207ENST00000536013 NESP48681 1621 aa23.73■■□□□ 1.39
PTPN6-207ENST00000536013 LAMC3Q9Y6N6 1575 aa23.71■■□□□ 1.39
PTPN6-207ENST00000536013 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
PTPN6-207ENST00000536013 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
PTPN6-207ENST00000536013 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
PTPN6-207ENST00000536013 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
PTPN6-207ENST00000536013 CFTRP13569 1480 aa23.52■■□□□ 1.36
PTPN6-207ENST00000536013 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
PTPN6-207ENST00000536013 CUX2O14529 1486 aa23.43■■□□□ 1.34
PTPN6-207ENST00000536013 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
PTPN6-207ENST00000536013 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
PTPN6-207ENST00000536013 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PTPN6-207ENST00000536013 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
PTPN6-207ENST00000536013 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
PTPN6-207ENST00000536013 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
PTPN6-207ENST00000536013 WDR62O43379 1518 aa23.24■■□□□ 1.31
PTPN6-207ENST00000536013 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
PTPN6-207ENST00000536013 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
PTPN6-207ENST00000536013 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
PTPN6-207ENST00000536013 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PTPN6-207ENST00000536013 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
PTPN6-207ENST00000536013 CUX1P39880 1505 aa22.82■■□□□ 1.24
PTPN6-207ENST00000536013 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
PTPN6-207ENST00000536013 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
PTPN6-207ENST00000536013 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
PTPN6-207ENST00000536013 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
PTPN6-207ENST00000536013 SOGA1O94964 1423 aa22.68■■□□□ 1.22
PTPN6-207ENST00000536013 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
PTPN6-207ENST00000536013 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
PTPN6-207ENST00000536013 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
PTPN6-207ENST00000536013 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
PTPN6-207ENST00000536013 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
PTPN6-207ENST00000536013 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
PTPN6-207ENST00000536013 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
PTPN6-207ENST00000536013 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
PTPN6-207ENST00000536013 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
PTPN6-207ENST00000536013 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
PTPN6-207ENST00000536013 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
PTPN6-207ENST00000536013 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
PTPN6-207ENST00000536013 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
PTPN6-207ENST00000536013 GAPVD1Q14C86 1478 aa22.43■■□□□ 1.18
PTPN6-207ENST00000536013 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
PTPN6-207ENST00000536013 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
PTPN6-207ENST00000536013 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
PTPN6-207ENST00000536013 PBRM1Q86U86 1689 aa22.37■■□□□ 1.17
PTPN6-207ENST00000536013 CHD1O14646 1710 aa22.34■■□□□ 1.17
PTPN6-207ENST00000536013 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
PTPN6-207ENST00000536013 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
PTPN6-207ENST00000536013 FBLN2P98095 1184 aa22.26■■□□□ 1.15
PTPN6-207ENST00000536013 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
PTPN6-207ENST00000536013 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
PTPN6-207ENST00000536013 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
PTPN6-207ENST00000536013 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
PTPN6-207ENST00000536013 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
PTPN6-207ENST00000536013 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
PTPN6-207ENST00000536013 IGF1RP08069 1367 aa22.12■■□□□ 1.13
PTPN6-207ENST00000536013 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
PTPN6-207ENST00000536013 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
PTPN6-207ENST00000536013 NUP160Q12769 1436 aa22.07■■□□□ 1.12
PTPN6-207ENST00000536013 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
PTPN6-207ENST00000536013 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
PTPN6-207ENST00000536013 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
PTPN6-207ENST00000536013 CUL7Q14999 1698 aa22.05■■□□□ 1.12
PTPN6-207ENST00000536013 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
PTPN6-207ENST00000536013 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
PTPN6-207ENST00000536013 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
PTPN6-207ENST00000536013 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
PTPN6-207ENST00000536013 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
PTPN6-207ENST00000536013 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
PTPN6-207ENST00000536013 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms