RNA–Protein interactions for RNA: ENST00000535904.5

PRB4-203, Transcript of proline rich protein BstNI subfamily 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PRB4, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB4-203ENST00000535904 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
PRB4-203ENST00000535904 ABCC9O60706 1549 aa19.18■□□□□ 0.66
PRB4-203ENST00000535904 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
PRB4-203ENST00000535904 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
PRB4-203ENST00000535904 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
PRB4-203ENST00000535904 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
PRB4-203ENST00000535904 NACADO15069 1562 aa18.01■□□□□ 0.47
PRB4-203ENST00000535904 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRB4-203ENST00000535904 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
PRB4-203ENST00000535904 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
PRB4-203ENST00000535904 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
PRB4-203ENST00000535904 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.39
PRB4-203ENST00000535904 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
PRB4-203ENST00000535904 SCRIBQ14160 1630 aa17.39■□□□□ 0.38
PRB4-203ENST00000535904 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
PRB4-203ENST00000535904 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
PRB4-203ENST00000535904 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
PRB4-203ENST00000535904 EIF4G1Q04637 1599 aaKnown RBP17.18■□□□□ 0.34
PRB4-203ENST00000535904 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
PRB4-203ENST00000535904 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
PRB4-203ENST00000535904 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
PRB4-203ENST00000535904 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
PRB4-203ENST00000535904 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
PRB4-203ENST00000535904 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
PRB4-203ENST00000535904 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
PRB4-203ENST00000535904 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
PRB4-203ENST00000535904 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
PRB4-203ENST00000535904 CUX2O14529 1486 aa16.46■□□□□ 0.23
PRB4-203ENST00000535904 NESP48681 1621 aa16.44■□□□□ 0.22
PRB4-203ENST00000535904 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
PRB4-203ENST00000535904 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
PRB4-203ENST00000535904 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
PRB4-203ENST00000535904 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
PRB4-203ENST00000535904 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
PRB4-203ENST00000535904 WIZO95785 1651 aa16.14■□□□□ 0.18
PRB4-203ENST00000535904 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
PRB4-203ENST00000535904 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
PRB4-203ENST00000535904 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
PRB4-203ENST00000535904 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
PRB4-203ENST00000535904 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
PRB4-203ENST00000535904 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
PRB4-203ENST00000535904 CFTRP13569 1480 aa16■□□□□ 0.15
PRB4-203ENST00000535904 WDR62O43379 1518 aa15.98■□□□□ 0.15
PRB4-203ENST00000535904 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
PRB4-203ENST00000535904 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
PRB4-203ENST00000535904 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
PRB4-203ENST00000535904 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
PRB4-203ENST00000535904 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
PRB4-203ENST00000535904 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
PRB4-203ENST00000535904 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
PRB4-203ENST00000535904 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
PRB4-203ENST00000535904 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
PRB4-203ENST00000535904 FBLN2P98095 1184 aa15.63■□□□□ 0.09
PRB4-203ENST00000535904 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
PRB4-203ENST00000535904 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
PRB4-203ENST00000535904 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
PRB4-203ENST00000535904 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
PRB4-203ENST00000535904 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
PRB4-203ENST00000535904 SOGA1O94964 1423 aa15.54■□□□□ 0.08
PRB4-203ENST00000535904 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
PRB4-203ENST00000535904 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
PRB4-203ENST00000535904 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
PRB4-203ENST00000535904 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
PRB4-203ENST00000535904 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
PRB4-203ENST00000535904 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
PRB4-203ENST00000535904 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
PRB4-203ENST00000535904 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
PRB4-203ENST00000535904 RIMBP3CA6NJZ7 1639 aa15.44■□□□□ 0.06
PRB4-203ENST00000535904 RIMBP3BA6NNM3 1639 aa15.44■□□□□ 0.06
PRB4-203ENST00000535904 RIMBP3Q9UFD9 1639 aa15.44■□□□□ 0.06
PRB4-203ENST00000535904 CUX1P39880 1505 aa15.41■□□□□ 0.06
PRB4-203ENST00000535904 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
PRB4-203ENST00000535904 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
PRB4-203ENST00000535904 GRIN2BQ13224 1484 aa15.37■□□□□ 0.05
PRB4-203ENST00000535904 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
PRB4-203ENST00000535904 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
PRB4-203ENST00000535904 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
PRB4-203ENST00000535904 CHD1O14646 1710 aa15.31■□□□□ 0.04
PRB4-203ENST00000535904 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
PRB4-203ENST00000535904 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
PRB4-203ENST00000535904 WRNQ14191 1432 aaPredicted RBP eCLIP15.28■□□□□ 0.04
PRB4-203ENST00000535904 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
PRB4-203ENST00000535904 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
PRB4-203ENST00000535904 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
PRB4-203ENST00000535904 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
PRB4-203ENST00000535904 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
PRB4-203ENST00000535904 FHAD1B1AJZ9 1412 aa15.13■□□□□ 0.01
PRB4-203ENST00000535904 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
PRB4-203ENST00000535904 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
PRB4-203ENST00000535904 NUP160Q12769 1436 aa15.09■□□□□ 0.01
PRB4-203ENST00000535904 JPH4Q96JJ6 628 aa15.06■□□□□ 0
PRB4-203ENST00000535904 ADAMTS12P58397 1594 aa15.06■□□□□ 0
PRB4-203ENST00000535904 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
PRB4-203ENST00000535904 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
PRB4-203ENST00000535904 CEP170Q5SW79 1584 aa15.03■□□□□ -0
PRB4-203ENST00000535904 ERCC6L2Q5T890 1561 aa15.02□□□□□ -0.01
PRB4-203ENST00000535904 PRG4Q92954 1404 aaPredicted RBP15.01□□□□□ -0.01
PRB4-203ENST00000535904 IGF1RP08069 1367 aa14.97□□□□□ -0.01
PRB4-203ENST00000535904 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRB4-203ENST00000535904 KIF27Q86VH2 1401 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms