RNA–Protein interactions for RNA: ENST00000535683.1

LINC00900-204, long intergenic non-protein coding RNA 900, humanhuman

TSL 3

Gene LINC00900, Length 504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00900-204ENST00000535683 NISCHQ9Y2I1 1504 aa48.98■■■■■ 5.43
LINC00900-204ENST00000535683 CCDC180Q9P1Z9 1646 aa44.02■■■■■ 4.64
LINC00900-204ENST00000535683 ABCC9O60706 1549 aa43.94■■■■■ 4.63
LINC00900-204ENST00000535683 RB1CC1Q8TDY2 1594 aa41.94■■■■■ 4.3
LINC00900-204ENST00000535683 NACADO15069 1562 aa41.67■■■■■ 4.26
LINC00900-204ENST00000535683 DCAF8L2P0C7V8 631 aa41.28■■■■■ 4.2
LINC00900-204ENST00000535683 DNAJC5BQ9UF47 199 aa41.19■■■■■ 4.18
LINC00900-204ENST00000535683 MYO15BQ96JP2 1530 aa41.15■■■■■ 4.18
LINC00900-204ENST00000535683 PABPN1Q86U42 306 aaKnown RBP eCLIP40.87■■■■■ 4.13
LINC00900-204ENST00000535683 UNC13AQ9UPW8 1703 aa40.78■■■■■ 4.12
LINC00900-204ENST00000535683 BICRAQ9NZM4 1560 aa40.58■■■■■ 4.09
LINC00900-204ENST00000535683 ZCCHC6Q5VYS8 1495 aaKnown RBP40.58■■■■■ 4.09
LINC00900-204ENST00000535683 DCAF1Q9Y4B6 1507 aa40.57■■■■■ 4.08
LINC00900-204ENST00000535683 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.04
LINC00900-204ENST00000535683 SCRIBQ14160 1630 aa39.96■■■■□ 3.99
LINC00900-204ENST00000535683 CC2D2AQ9P2K1 1620 aa39.72■■■■□ 3.95
LINC00900-204ENST00000535683 CECR2Q9BXF3 1484 aa39.67■■■■□ 3.94
LINC00900-204ENST00000535683 EIF4G1Q04637 1599 aaKnown RBP39.66■■■■□ 3.94
LINC00900-204ENST00000535683 NCAPD3P42695 1498 aa38.45■■■■□ 3.75
LINC00900-204ENST00000535683 ATAD2BQ9ULI0 1458 aa38.27■■■■□ 3.72
LINC00900-204ENST00000535683 SMARCA2P51531 1590 aa38.23■■■■□ 3.71
LINC00900-204ENST00000535683 SMARCA4P51532 1647 aa38.18■■■■□ 3.7
LINC00900-204ENST00000535683 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
LINC00900-204ENST00000535683 BAZ1AQ9NRL2 1556 aaPredicted RBP38.07■■■■□ 3.69
LINC00900-204ENST00000535683 CUX2O14529 1486 aa38.07■■■■□ 3.68
LINC00900-204ENST00000535683 ERCC6Q03468 1493 aa38.05■■■■□ 3.68
LINC00900-204ENST00000535683 DNAJC5Q9H3Z4 198 aa38.05■■■■□ 3.68
LINC00900-204ENST00000535683 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
LINC00900-204ENST00000535683 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
LINC00900-204ENST00000535683 NESP48681 1621 aa37.69■■■■□ 3.62
LINC00900-204ENST00000535683 MROH2BQ7Z745 1585 aa37.65■■■■□ 3.62
LINC00900-204ENST00000535683 LAMC3Q9Y6N6 1575 aa37.59■■■■□ 3.61
LINC00900-204ENST00000535683 PDS5BQ9NTI5 1447 aa37.43■■■■□ 3.58
LINC00900-204ENST00000535683 THOC2Q8NI27 1593 aaKnown RBP37.38■■■■□ 3.58
LINC00900-204ENST00000535683 CADPSQ9ULU8 1353 aa37.27■■■■□ 3.56
LINC00900-204ENST00000535683 KIF21AQ7Z4S6 1674 aa37.2■■■■□ 3.55
LINC00900-204ENST00000535683 WIZO95785 1651 aa37.15■■■■□ 3.54
LINC00900-204ENST00000535683 MRC2Q9UBG0 1479 aa37.03■■■■□ 3.52
LINC00900-204ENST00000535683 WDR62O43379 1518 aa36.93■■■■□ 3.5
LINC00900-204ENST00000535683 RSF1Q96T23 1441 aaPredicted RBP36.91■■■■□ 3.5
LINC00900-204ENST00000535683 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
LINC00900-204ENST00000535683 CFTRP13569 1480 aa36.82■■■■□ 3.49
LINC00900-204ENST00000535683 TOP2AP11388 1531 aaKnown RBP36.81■■■■□ 3.48
LINC00900-204ENST00000535683 FANCD2Q9BXW9 1451 aa36.81■■■■□ 3.48
LINC00900-204ENST00000535683 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
LINC00900-204ENST00000535683 PRDM2Q13029 1718 aa36.38■■■■□ 3.41
LINC00900-204ENST00000535683 CCDC88BA6NC98 1476 aa36.35■■■■□ 3.41
LINC00900-204ENST00000535683 OSCARQ8IYS5 282 aa36.3■■■■□ 3.4
LINC00900-204ENST00000535683 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
LINC00900-204ENST00000535683 IFT140Q96RY7 1462 aa36.18■■■■□ 3.38
LINC00900-204ENST00000535683 ABCC8Q09428 1581 aa36.16■■■■□ 3.38
LINC00900-204ENST00000535683 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
LINC00900-204ENST00000535683 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
LINC00900-204ENST00000535683 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
LINC00900-204ENST00000535683 EIF4G3O43432 1585 aaKnown RBP35.81■■■■□ 3.32
LINC00900-204ENST00000535683 TARBP1Q13395 1621 aaKnown RBP35.74■■■■□ 3.31
LINC00900-204ENST00000535683 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
LINC00900-204ENST00000535683 RIMBP3CA6NJZ7 1639 aa35.7■■■■□ 3.31
LINC00900-204ENST00000535683 RIMBP3BA6NNM3 1639 aa35.7■■■■□ 3.31
LINC00900-204ENST00000535683 RIMBP3Q9UFD9 1639 aa35.7■■■■□ 3.31
LINC00900-204ENST00000535683 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.3
LINC00900-204ENST00000535683 ARHGEF11O15085 1522 aa35.63■■■■□ 3.29
LINC00900-204ENST00000535683 SOGA1O94964 1423 aa35.57■■■■□ 3.29
LINC00900-204ENST00000535683 WDR97A6NE52 1622 aa35.55■■■■□ 3.28
LINC00900-204ENST00000535683 RAD54L2Q9Y4B4 1467 aa35.51■■■■□ 3.28
LINC00900-204ENST00000535683 CHD1O14646 1710 aa35.5■■■■□ 3.27
LINC00900-204ENST00000535683 FBLN2P98095 1184 aa35.48■■■■□ 3.27
LINC00900-204ENST00000535683 FGD5Q6ZNL6 1462 aa35.46■■■■□ 3.27
LINC00900-204ENST00000535683 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
LINC00900-204ENST00000535683 CUX1P39880 1505 aa35.39■■■■□ 3.26
LINC00900-204ENST00000535683 CYB5RLQ6IPT4 315 aa35.36■■■■□ 3.25
LINC00900-204ENST00000535683 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
LINC00900-204ENST00000535683 SNAPC4Q5SXM2 1469 aa35.34■■■■□ 3.25
LINC00900-204ENST00000535683 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
LINC00900-204ENST00000535683 CHMP7Q8WUX9 453 aaPredicted RBP35.28■■■■□ 3.24
LINC00900-204ENST00000535683 ARAP1Q96P48 1450 aa35.25■■■■□ 3.23
LINC00900-204ENST00000535683 SYNJ1O43426 1573 aa35.22■■■■□ 3.23
LINC00900-204ENST00000535683 SYNJ2O15056 1496 aa35.2■■■■□ 3.23
LINC00900-204ENST00000535683 CLASP1Q7Z460 1538 aa35.17■■■■□ 3.22
LINC00900-204ENST00000535683 SUPT5HO00267 1087 aaKnown RBP35.16■■■■□ 3.22
LINC00900-204ENST00000535683 GAPVD1Q14C86 1478 aa35.15■■■■□ 3.22
LINC00900-204ENST00000535683 ABCA10Q8WWZ4 1543 aa35.12■■■■□ 3.21
LINC00900-204ENST00000535683 PBRM1Q86U86 1689 aa35.05■■■■□ 3.2
LINC00900-204ENST00000535683 ABCA5Q8WWZ7 1642 aa35.02■■■■□ 3.2
LINC00900-204ENST00000535683 WRNQ14191 1432 aaPredicted RBP eCLIP35.01■■■■□ 3.2
LINC00900-204ENST00000535683 TRHP20396 242 aaPredicted RBP35.01■■■■□ 3.2
LINC00900-204ENST00000535683 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
LINC00900-204ENST00000535683 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
LINC00900-204ENST00000535683 GRIN2AQ12879 1464 aa34.82■■■■□ 3.16
LINC00900-204ENST00000535683 ADAMTS12P58397 1594 aa34.76■■■■□ 3.16
LINC00900-204ENST00000535683 FHAD1B1AJZ9 1412 aa34.73■■■■□ 3.15
LINC00900-204ENST00000535683 NUP160Q12769 1436 aa34.72■■■■□ 3.15
LINC00900-204ENST00000535683 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
LINC00900-204ENST00000535683 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
LINC00900-204ENST00000535683 SHROOM2Q13796 1616 aa34.54■■■■□ 3.12
LINC00900-204ENST00000535683 ERCC6L2Q5T890 1561 aa34.49■■■■□ 3.11
LINC00900-204ENST00000535683 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
LINC00900-204ENST00000535683 PRG4Q92954 1404 aaPredicted RBP34.37■■■■□ 3.09
LINC00900-204ENST00000535683 RUSC2Q8N2Y8 1516 aa34.27■■■■□ 3.08
LINC00900-204ENST00000535683 KIF27Q86VH2 1401 aa34.26■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms