RNA–Protein interactions for RNA: ENST00000535513.1

AP3B2-205, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-205ENST00000535513 NISCHQ9Y2I1 1504 aa40.56■■■■■ 4.08
AP3B2-205ENST00000535513 ABCC9O60706 1549 aa36.53■■■■□ 3.44
AP3B2-205ENST00000535513 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
AP3B2-205ENST00000535513 RB1CC1Q8TDY2 1594 aa34.76■■■■□ 3.16
AP3B2-205ENST00000535513 NACADO15069 1562 aa34.49■■■■□ 3.11
AP3B2-205ENST00000535513 DCAF8L2P0C7V8 631 aa34.3■■■■□ 3.08
AP3B2-205ENST00000535513 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
AP3B2-205ENST00000535513 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
AP3B2-205ENST00000535513 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
AP3B2-205ENST00000535513 UNC13AQ9UPW8 1703 aa33.85■■■■□ 3.01
AP3B2-205ENST00000535513 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
AP3B2-205ENST00000535513 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
AP3B2-205ENST00000535513 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
AP3B2-205ENST00000535513 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
AP3B2-205ENST00000535513 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
AP3B2-205ENST00000535513 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
AP3B2-205ENST00000535513 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
AP3B2-205ENST00000535513 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
AP3B2-205ENST00000535513 NCAPD3P42695 1498 aa31.83■■■□□ 2.69
AP3B2-205ENST00000535513 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
AP3B2-205ENST00000535513 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
AP3B2-205ENST00000535513 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
AP3B2-205ENST00000535513 HMGXB3Q12766 1538 aa31.61■■■□□ 2.65
AP3B2-205ENST00000535513 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
AP3B2-205ENST00000535513 DNAJC5Q9H3Z4 198 aa31.58■■■□□ 2.65
AP3B2-205ENST00000535513 CUX2O14529 1486 aa31.55■■■□□ 2.64
AP3B2-205ENST00000535513 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
AP3B2-205ENST00000535513 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
AP3B2-205ENST00000535513 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
AP3B2-205ENST00000535513 NESP48681 1621 aa31.32■■■□□ 2.6
AP3B2-205ENST00000535513 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
AP3B2-205ENST00000535513 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
AP3B2-205ENST00000535513 THOC2Q8NI27 1593 aaKnown RBP31.05■■■□□ 2.56
AP3B2-205ENST00000535513 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
AP3B2-205ENST00000535513 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
AP3B2-205ENST00000535513 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
AP3B2-205ENST00000535513 WIZO95785 1651 aa30.84■■■□□ 2.53
AP3B2-205ENST00000535513 MRC2Q9UBG0 1479 aa30.72■■■□□ 2.51
AP3B2-205ENST00000535513 WDR62O43379 1518 aa30.63■■■□□ 2.49
AP3B2-205ENST00000535513 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
AP3B2-205ENST00000535513 RSF1Q96T23 1441 aaPredicted RBP30.57■■■□□ 2.48
AP3B2-205ENST00000535513 FANCD2Q9BXW9 1451 aa30.53■■■□□ 2.48
AP3B2-205ENST00000535513 TOP2AP11388 1531 aaKnown RBP30.51■■■□□ 2.47
AP3B2-205ENST00000535513 CFTRP13569 1480 aa30.49■■■□□ 2.47
AP3B2-205ENST00000535513 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
AP3B2-205ENST00000535513 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
AP3B2-205ENST00000535513 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
AP3B2-205ENST00000535513 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
AP3B2-205ENST00000535513 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
AP3B2-205ENST00000535513 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
AP3B2-205ENST00000535513 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
AP3B2-205ENST00000535513 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
AP3B2-205ENST00000535513 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
AP3B2-205ENST00000535513 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
AP3B2-205ENST00000535513 EIF4G3O43432 1585 aaKnown RBP29.75■■■□□ 2.35
AP3B2-205ENST00000535513 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
AP3B2-205ENST00000535513 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
AP3B2-205ENST00000535513 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
AP3B2-205ENST00000535513 TARBP1Q13395 1621 aaKnown RBP29.63■■■□□ 2.33
AP3B2-205ENST00000535513 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.33
AP3B2-205ENST00000535513 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
AP3B2-205ENST00000535513 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
AP3B2-205ENST00000535513 CHD1O14646 1710 aa29.51■■■□□ 2.31
AP3B2-205ENST00000535513 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
AP3B2-205ENST00000535513 SOGA1O94964 1423 aa29.48■■■□□ 2.31
AP3B2-205ENST00000535513 FBLN2P98095 1184 aa29.48■■■□□ 2.31
AP3B2-205ENST00000535513 FGD5Q6ZNL6 1462 aa29.43■■■□□ 2.3
AP3B2-205ENST00000535513 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
AP3B2-205ENST00000535513 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
AP3B2-205ENST00000535513 CYB5RLQ6IPT4 315 aa29.37■■■□□ 2.29
AP3B2-205ENST00000535513 CUX1P39880 1505 aa29.36■■■□□ 2.29
AP3B2-205ENST00000535513 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
AP3B2-205ENST00000535513 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
AP3B2-205ENST00000535513 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
AP3B2-205ENST00000535513 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
AP3B2-205ENST00000535513 CHMP7Q8WUX9 453 aaPredicted RBP29.25■■■□□ 2.27
AP3B2-205ENST00000535513 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
AP3B2-205ENST00000535513 CLASP1Q7Z460 1538 aa29.19■■■□□ 2.26
AP3B2-205ENST00000535513 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
AP3B2-205ENST00000535513 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
AP3B2-205ENST00000535513 GAPVD1Q14C86 1478 aa29.13■■■□□ 2.25
AP3B2-205ENST00000535513 TRHP20396 242 aaPredicted RBP29.11■■■□□ 2.25
AP3B2-205ENST00000535513 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
AP3B2-205ENST00000535513 PBRM1Q86U86 1689 aa29.09■■■□□ 2.25
AP3B2-205ENST00000535513 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
AP3B2-205ENST00000535513 WRNQ14191 1432 aaPredicted RBP eCLIP28.98■■■□□ 2.23
AP3B2-205ENST00000535513 TOP2BQ02880 1626 aa28.88■■■□□ 2.21
AP3B2-205ENST00000535513 GRIN2AQ12879 1464 aa28.88■■■□□ 2.21
AP3B2-205ENST00000535513 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
AP3B2-205ENST00000535513 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
AP3B2-205ENST00000535513 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
AP3B2-205ENST00000535513 NUP160Q12769 1436 aa28.77■■■□□ 2.2
AP3B2-205ENST00000535513 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
AP3B2-205ENST00000535513 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
AP3B2-205ENST00000535513 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
AP3B2-205ENST00000535513 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
AP3B2-205ENST00000535513 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
AP3B2-205ENST00000535513 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
AP3B2-205ENST00000535513 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
AP3B2-205ENST00000535513 KIF27Q86VH2 1401 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms