RNA–Protein interactions for RNA: ENST00000535462.5

PTPN6-206, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-206ENST00000535462 NISCHQ9Y2I1 1504 aa39.82■■■■□ 3.97
PTPN6-206ENST00000535462 CCDC180Q9P1Z9 1646 aa35.92■■■■□ 3.34
PTPN6-206ENST00000535462 ABCC9O60706 1549 aa35.76■■■■□ 3.31
PTPN6-206ENST00000535462 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
PTPN6-206ENST00000535462 NACADO15069 1562 aa33.96■■■■□ 3.03
PTPN6-206ENST00000535462 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
PTPN6-206ENST00000535462 DNAJC5BQ9UF47 199 aa33.53■■■□□ 2.96
PTPN6-206ENST00000535462 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
PTPN6-206ENST00000535462 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
PTPN6-206ENST00000535462 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
PTPN6-206ENST00000535462 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
PTPN6-206ENST00000535462 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
PTPN6-206ENST00000535462 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.88
PTPN6-206ENST00000535462 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
PTPN6-206ENST00000535462 SCRIBQ14160 1630 aa32.5■■■□□ 2.79
PTPN6-206ENST00000535462 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
PTPN6-206ENST00000535462 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
PTPN6-206ENST00000535462 CECR2Q9BXF3 1484 aa32.31■■■□□ 2.76
PTPN6-206ENST00000535462 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
PTPN6-206ENST00000535462 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
PTPN6-206ENST00000535462 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
PTPN6-206ENST00000535462 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
PTPN6-206ENST00000535462 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
PTPN6-206ENST00000535462 CUX2O14529 1486 aa31.08■■■□□ 2.57
PTPN6-206ENST00000535462 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
PTPN6-206ENST00000535462 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
PTPN6-206ENST00000535462 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
PTPN6-206ENST00000535462 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
PTPN6-206ENST00000535462 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
PTPN6-206ENST00000535462 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
PTPN6-206ENST00000535462 NESP48681 1621 aa30.65■■■□□ 2.5
PTPN6-206ENST00000535462 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
PTPN6-206ENST00000535462 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
PTPN6-206ENST00000535462 PDS5BQ9NTI5 1447 aa30.45■■■□□ 2.46
PTPN6-206ENST00000535462 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
PTPN6-206ENST00000535462 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
PTPN6-206ENST00000535462 WIZO95785 1651 aa30.22■■■□□ 2.43
PTPN6-206ENST00000535462 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
PTPN6-206ENST00000535462 WDR62O43379 1518 aa30.12■■■□□ 2.41
PTPN6-206ENST00000535462 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
PTPN6-206ENST00000535462 CFTRP13569 1480 aa29.96■■■□□ 2.39
PTPN6-206ENST00000535462 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
PTPN6-206ENST00000535462 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
PTPN6-206ENST00000535462 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
PTPN6-206ENST00000535462 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
PTPN6-206ENST00000535462 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
PTPN6-206ENST00000535462 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
PTPN6-206ENST00000535462 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
PTPN6-206ENST00000535462 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
PTPN6-206ENST00000535462 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
PTPN6-206ENST00000535462 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PTPN6-206ENST00000535462 TOPBP1Q92547 1522 aa29.36■■■□□ 2.29
PTPN6-206ENST00000535462 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
PTPN6-206ENST00000535462 ZNF608Q9ULD9 1512 aaPredicted RBP29.26■■■□□ 2.27
PTPN6-206ENST00000535462 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
PTPN6-206ENST00000535462 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
PTPN6-206ENST00000535462 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
PTPN6-206ENST00000535462 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
PTPN6-206ENST00000535462 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
PTPN6-206ENST00000535462 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
PTPN6-206ENST00000535462 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
PTPN6-206ENST00000535462 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
PTPN6-206ENST00000535462 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.23
PTPN6-206ENST00000535462 CHD1O14646 1710 aa28.97■■■□□ 2.23
PTPN6-206ENST00000535462 SOGA1O94964 1423 aa28.89■■■□□ 2.22
PTPN6-206ENST00000535462 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
PTPN6-206ENST00000535462 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
PTPN6-206ENST00000535462 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
PTPN6-206ENST00000535462 TDRD9Q8NDG6 1382 aaKnown RBP28.77■■■□□ 2.2
PTPN6-206ENST00000535462 FBLN2P98095 1184 aa28.77■■■□□ 2.2
PTPN6-206ENST00000535462 CUX1P39880 1505 aa28.77■■■□□ 2.2
PTPN6-206ENST00000535462 SNAPC4Q5SXM2 1469 aa28.74■■■□□ 2.19
PTPN6-206ENST00000535462 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
PTPN6-206ENST00000535462 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
PTPN6-206ENST00000535462 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
PTPN6-206ENST00000535462 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
PTPN6-206ENST00000535462 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
PTPN6-206ENST00000535462 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
PTPN6-206ENST00000535462 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.18
PTPN6-206ENST00000535462 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
PTPN6-206ENST00000535462 ABCA10Q8WWZ4 1543 aa28.58■■■□□ 2.17
PTPN6-206ENST00000535462 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
PTPN6-206ENST00000535462 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
PTPN6-206ENST00000535462 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.14
PTPN6-206ENST00000535462 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
PTPN6-206ENST00000535462 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
PTPN6-206ENST00000535462 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
PTPN6-206ENST00000535462 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
PTPN6-206ENST00000535462 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
PTPN6-206ENST00000535462 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
PTPN6-206ENST00000535462 NUP160Q12769 1436 aa28.26■■■□□ 2.12
PTPN6-206ENST00000535462 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
PTPN6-206ENST00000535462 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
PTPN6-206ENST00000535462 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
PTPN6-206ENST00000535462 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
PTPN6-206ENST00000535462 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
PTPN6-206ENST00000535462 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
PTPN6-206ENST00000535462 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
PTPN6-206ENST00000535462 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
PTPN6-206ENST00000535462 CUL7Q14999 1698 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms