RNA–Protein interactions for RNA: ENST00000535459.5

SOD2-208, Transcript of superoxide dismutase 2, humanhuman

TSL 2

Gene SOD2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-208ENST00000535459 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
SOD2-208ENST00000535459 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
SOD2-208ENST00000535459 ABCC9O60706 1549 aa26.19■■□□□ 1.78
SOD2-208ENST00000535459 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
SOD2-208ENST00000535459 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
SOD2-208ENST00000535459 NACADO15069 1562 aa24.99■■□□□ 1.59
SOD2-208ENST00000535459 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
SOD2-208ENST00000535459 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
SOD2-208ENST00000535459 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
SOD2-208ENST00000535459 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
SOD2-208ENST00000535459 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
SOD2-208ENST00000535459 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
SOD2-208ENST00000535459 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
SOD2-208ENST00000535459 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
SOD2-208ENST00000535459 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
SOD2-208ENST00000535459 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
SOD2-208ENST00000535459 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
SOD2-208ENST00000535459 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
SOD2-208ENST00000535459 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
SOD2-208ENST00000535459 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
SOD2-208ENST00000535459 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
SOD2-208ENST00000535459 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
SOD2-208ENST00000535459 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
SOD2-208ENST00000535459 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
SOD2-208ENST00000535459 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
SOD2-208ENST00000535459 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
SOD2-208ENST00000535459 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
SOD2-208ENST00000535459 WIZO95785 1651 aa22.97■■□□□ 1.27
SOD2-208ENST00000535459 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
SOD2-208ENST00000535459 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
SOD2-208ENST00000535459 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
SOD2-208ENST00000535459 NESP48681 1621 aa22.71■■□□□ 1.23
SOD2-208ENST00000535459 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
SOD2-208ENST00000535459 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
SOD2-208ENST00000535459 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
SOD2-208ENST00000535459 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
SOD2-208ENST00000535459 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
SOD2-208ENST00000535459 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
SOD2-208ENST00000535459 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
SOD2-208ENST00000535459 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
SOD2-208ENST00000535459 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
SOD2-208ENST00000535459 CFTRP13569 1480 aa22.28■■□□□ 1.16
SOD2-208ENST00000535459 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
SOD2-208ENST00000535459 PRDM2Q13029 1718 aa22.19■■□□□ 1.14
SOD2-208ENST00000535459 CUX2O14529 1486 aa22.18■■□□□ 1.14
SOD2-208ENST00000535459 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
SOD2-208ENST00000535459 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
SOD2-208ENST00000535459 WDR62O43379 1518 aa22.06■■□□□ 1.12
SOD2-208ENST00000535459 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
SOD2-208ENST00000535459 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
SOD2-208ENST00000535459 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
SOD2-208ENST00000535459 CUX1P39880 1505 aa21.73■■□□□ 1.07
SOD2-208ENST00000535459 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SOD2-208ENST00000535459 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
SOD2-208ENST00000535459 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
SOD2-208ENST00000535459 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
SOD2-208ENST00000535459 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
SOD2-208ENST00000535459 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
SOD2-208ENST00000535459 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
SOD2-208ENST00000535459 DNAJC5Q9H3Z4 198 aa21.61■■□□□ 1.05
SOD2-208ENST00000535459 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
SOD2-208ENST00000535459 SOGA1O94964 1423 aa21.56■■□□□ 1.04
SOD2-208ENST00000535459 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.04
SOD2-208ENST00000535459 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
SOD2-208ENST00000535459 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
SOD2-208ENST00000535459 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
SOD2-208ENST00000535459 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
SOD2-208ENST00000535459 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
SOD2-208ENST00000535459 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
SOD2-208ENST00000535459 CHD1O14646 1710 aa21.38■■□□□ 1.01
SOD2-208ENST00000535459 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
SOD2-208ENST00000535459 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
SOD2-208ENST00000535459 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
SOD2-208ENST00000535459 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
SOD2-208ENST00000535459 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
SOD2-208ENST00000535459 OSCARQ8IYS5 282 aa21.3■■□□□ 1
SOD2-208ENST00000535459 FBLN2P98095 1184 aa21.29■■□□□ 1
SOD2-208ENST00000535459 GRIN2BQ13224 1484 aa21.27■■□□□ 1
SOD2-208ENST00000535459 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
SOD2-208ENST00000535459 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
SOD2-208ENST00000535459 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
SOD2-208ENST00000535459 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
SOD2-208ENST00000535459 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
SOD2-208ENST00000535459 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SOD2-208ENST00000535459 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SOD2-208ENST00000535459 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SOD2-208ENST00000535459 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
SOD2-208ENST00000535459 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
SOD2-208ENST00000535459 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
SOD2-208ENST00000535459 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
SOD2-208ENST00000535459 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
SOD2-208ENST00000535459 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
SOD2-208ENST00000535459 CEP170Q5SW79 1584 aa21.01■□□□□ 0.95
SOD2-208ENST00000535459 IGF1RP08069 1367 aa21■□□□□ 0.95
SOD2-208ENST00000535459 TRIM41Q8WV44 630 aa21■□□□□ 0.95
SOD2-208ENST00000535459 NUP160Q12769 1436 aa20.92■□□□□ 0.94
SOD2-208ENST00000535459 CUL7Q14999 1698 aa20.9■□□□□ 0.94
SOD2-208ENST00000535459 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.93
SOD2-208ENST00000535459 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
SOD2-208ENST00000535459 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms