RNA–Protein interactions for RNA: ENST00000535372.1

SOD2-207, Transcript of superoxide dismutase 2, humanhuman

TSL 1 (best)

Gene SOD2, Length 1,718 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-207ENST00000535372 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
SOD2-207ENST00000535372 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
SOD2-207ENST00000535372 ABCC9O60706 1549 aa29.86■■■□□ 2.37
SOD2-207ENST00000535372 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
SOD2-207ENST00000535372 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
SOD2-207ENST00000535372 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
SOD2-207ENST00000535372 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
SOD2-207ENST00000535372 NACADO15069 1562 aa29.12■■■□□ 2.25
SOD2-207ENST00000535372 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
SOD2-207ENST00000535372 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
SOD2-207ENST00000535372 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
SOD2-207ENST00000535372 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
SOD2-207ENST00000535372 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
SOD2-207ENST00000535372 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.08
SOD2-207ENST00000535372 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
SOD2-207ENST00000535372 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
SOD2-207ENST00000535372 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
SOD2-207ENST00000535372 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
SOD2-207ENST00000535372 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
SOD2-207ENST00000535372 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
SOD2-207ENST00000535372 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
SOD2-207ENST00000535372 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
SOD2-207ENST00000535372 SMARCA2P51531 1590 aa27■■□□□ 1.91
SOD2-207ENST00000535372 ATAD2BQ9ULI0 1458 aa26.97■■□□□ 1.91
SOD2-207ENST00000535372 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
SOD2-207ENST00000535372 WIZO95785 1651 aa26.93■■□□□ 1.9
SOD2-207ENST00000535372 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
SOD2-207ENST00000535372 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
SOD2-207ENST00000535372 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
SOD2-207ENST00000535372 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
SOD2-207ENST00000535372 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
SOD2-207ENST00000535372 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
SOD2-207ENST00000535372 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
SOD2-207ENST00000535372 CFTRP13569 1480 aa26.1■■□□□ 1.77
SOD2-207ENST00000535372 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
SOD2-207ENST00000535372 NESP48681 1621 aa25.99■■□□□ 1.75
SOD2-207ENST00000535372 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
SOD2-207ENST00000535372 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
SOD2-207ENST00000535372 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
SOD2-207ENST00000535372 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
SOD2-207ENST00000535372 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
SOD2-207ENST00000535372 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
SOD2-207ENST00000535372 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
SOD2-207ENST00000535372 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
SOD2-207ENST00000535372 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
SOD2-207ENST00000535372 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
SOD2-207ENST00000535372 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
SOD2-207ENST00000535372 CUX1P39880 1505 aa25.49■■□□□ 1.67
SOD2-207ENST00000535372 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
SOD2-207ENST00000535372 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
SOD2-207ENST00000535372 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
SOD2-207ENST00000535372 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
SOD2-207ENST00000535372 SYNJ1O43426 1573 aa25.45■■□□□ 1.66
SOD2-207ENST00000535372 THOC2Q8NI27 1593 aaKnown RBP25.42■■□□□ 1.66
SOD2-207ENST00000535372 WDR62O43379 1518 aa25.42■■□□□ 1.66
SOD2-207ENST00000535372 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
SOD2-207ENST00000535372 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
SOD2-207ENST00000535372 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
SOD2-207ENST00000535372 SOGA1O94964 1423 aa25.25■■□□□ 1.63
SOD2-207ENST00000535372 CUX2O14529 1486 aa25.2■■□□□ 1.62
SOD2-207ENST00000535372 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
SOD2-207ENST00000535372 RAD54L2Q9Y4B4 1467 aa25.17■■□□□ 1.62
SOD2-207ENST00000535372 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
SOD2-207ENST00000535372 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
SOD2-207ENST00000535372 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
SOD2-207ENST00000535372 EEA1Q15075 1411 aa25.03■■□□□ 1.6
SOD2-207ENST00000535372 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
SOD2-207ENST00000535372 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
SOD2-207ENST00000535372 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
SOD2-207ENST00000535372 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
SOD2-207ENST00000535372 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
SOD2-207ENST00000535372 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.58
SOD2-207ENST00000535372 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
SOD2-207ENST00000535372 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
SOD2-207ENST00000535372 CSRNP3Q8WYN3 585 aa24.91■■□□□ 1.58
SOD2-207ENST00000535372 EIF4G3O43432 1585 aaKnown RBP24.89■■□□□ 1.58
SOD2-207ENST00000535372 GRIN2BQ13224 1484 aa24.87■■□□□ 1.57
SOD2-207ENST00000535372 IGF1RP08069 1367 aa24.85■■□□□ 1.57
SOD2-207ENST00000535372 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
SOD2-207ENST00000535372 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
SOD2-207ENST00000535372 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
SOD2-207ENST00000535372 MAGI1Q96QZ7 1491 aaPredicted RBP24.74■■□□□ 1.55
SOD2-207ENST00000535372 CUL7Q14999 1698 aa24.73■■□□□ 1.55
SOD2-207ENST00000535372 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
SOD2-207ENST00000535372 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
SOD2-207ENST00000535372 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
SOD2-207ENST00000535372 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
SOD2-207ENST00000535372 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
SOD2-207ENST00000535372 ADAMTS12P58397 1594 aa24.65■■□□□ 1.54
SOD2-207ENST00000535372 KIF21BO75037 1637 aa24.64■■□□□ 1.53
SOD2-207ENST00000535372 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
SOD2-207ENST00000535372 FBLN2P98095 1184 aa24.63■■□□□ 1.53
SOD2-207ENST00000535372 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
SOD2-207ENST00000535372 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
SOD2-207ENST00000535372 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
SOD2-207ENST00000535372 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
SOD2-207ENST00000535372 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
SOD2-207ENST00000535372 CHD1O14646 1710 aa24.43■■□□□ 1.5
SOD2-207ENST00000535372 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
SOD2-207ENST00000535372 NUP160Q12769 1436 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms