RNA–Protein interactions for RNA: ENST00000535367.1

C12orf43-205, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf43, Length 645 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-205ENST00000535367 NISCHQ9Y2I1 1504 aa44.3■■■■■ 4.68
C12orf43-205ENST00000535367 CCDC180Q9P1Z9 1646 aa39.45■■■■□ 3.91
C12orf43-205ENST00000535367 ABCC9O60706 1549 aa38.66■■■■□ 3.78
C12orf43-205ENST00000535367 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
C12orf43-205ENST00000535367 DCAF8L2P0C7V8 631 aa37.14■■■■□ 3.54
C12orf43-205ENST00000535367 NACADO15069 1562 aa37.09■■■■□ 3.53
C12orf43-205ENST00000535367 ZCCHC6Q5VYS8 1495 aaKnown RBP36.88■■■■□ 3.5
C12orf43-205ENST00000535367 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
C12orf43-205ENST00000535367 DCAF1Q9Y4B6 1507 aa36.63■■■■□ 3.45
C12orf43-205ENST00000535367 UNC13AQ9UPW8 1703 aa36.31■■■■□ 3.4
C12orf43-205ENST00000535367 PABPN1Q86U42 306 aaKnown RBP eCLIP36.11■■■■□ 3.37
C12orf43-205ENST00000535367 SCRIBQ14160 1630 aa36.01■■■■□ 3.35
C12orf43-205ENST00000535367 BICRAQ9NZM4 1560 aa35.98■■■■□ 3.35
C12orf43-205ENST00000535367 SHROOM4Q9ULL8 1493 aa35.63■■■■□ 3.29
C12orf43-205ENST00000535367 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
C12orf43-205ENST00000535367 EIF4G1Q04637 1599 aaKnown RBP35.07■■■■□ 3.2
C12orf43-205ENST00000535367 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
C12orf43-205ENST00000535367 CECR2Q9BXF3 1484 aa34.73■■■■□ 3.15
C12orf43-205ENST00000535367 SMARCA4P51532 1647 aa34.41■■■■□ 3.1
C12orf43-205ENST00000535367 BAZ1AQ9NRL2 1556 aaPredicted RBP34.37■■■■□ 3.09
C12orf43-205ENST00000535367 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
C12orf43-205ENST00000535367 SMARCA2P51531 1590 aa34.21■■■■□ 3.07
C12orf43-205ENST00000535367 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
C12orf43-205ENST00000535367 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
C12orf43-205ENST00000535367 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
C12orf43-205ENST00000535367 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
C12orf43-205ENST00000535367 BAZ1BQ9UIG0 1483 aaKnown RBP33.98■■■■□ 3.03
C12orf43-205ENST00000535367 WIZO95785 1651 aa33.8■■■■□ 3
C12orf43-205ENST00000535367 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
C12orf43-205ENST00000535367 TOP2AP11388 1531 aaKnown RBP33.43■■■□□ 2.94
C12orf43-205ENST00000535367 NESP48681 1621 aa33.41■■■□□ 2.94
C12orf43-205ENST00000535367 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
C12orf43-205ENST00000535367 LAMC3Q9Y6N6 1575 aa33.34■■■□□ 2.93
C12orf43-205ENST00000535367 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
C12orf43-205ENST00000535367 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
C12orf43-205ENST00000535367 KIF21AQ7Z4S6 1674 aa33.05■■■□□ 2.88
C12orf43-205ENST00000535367 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
C12orf43-205ENST00000535367 CUX2O14529 1486 aa32.99■■■□□ 2.87
C12orf43-205ENST00000535367 CFTRP13569 1480 aa32.99■■■□□ 2.87
C12orf43-205ENST00000535367 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
C12orf43-205ENST00000535367 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
C12orf43-205ENST00000535367 FANCD2Q9BXW9 1451 aa32.86■■■□□ 2.85
C12orf43-205ENST00000535367 CEP164Q9UPV0 1460 aa32.84■■■□□ 2.85
C12orf43-205ENST00000535367 PRDM2Q13029 1718 aa32.8■■■□□ 2.84
C12orf43-205ENST00000535367 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
C12orf43-205ENST00000535367 WDR62O43379 1518 aa32.66■■■□□ 2.82
C12orf43-205ENST00000535367 URB2Q14146 1524 aaKnown RBP32.51■■■□□ 2.79
C12orf43-205ENST00000535367 ABCC8Q09428 1581 aa32.33■■■□□ 2.77
C12orf43-205ENST00000535367 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
C12orf43-205ENST00000535367 DNMBPQ6XZF7 1577 aa32.29■■■□□ 2.76
C12orf43-205ENST00000535367 IFT140Q96RY7 1462 aa32.14■■■□□ 2.74
C12orf43-205ENST00000535367 CUX1P39880 1505 aa32.04■■■□□ 2.72
C12orf43-205ENST00000535367 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
C12orf43-205ENST00000535367 DNAJC5Q9H3Z4 198 aa32.01■■■□□ 2.71
C12orf43-205ENST00000535367 ZNF608Q9ULD9 1512 aaPredicted RBP31.97■■■□□ 2.71
C12orf43-205ENST00000535367 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
C12orf43-205ENST00000535367 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.71
C12orf43-205ENST00000535367 SOGA1O94964 1423 aa31.92■■■□□ 2.7
C12orf43-205ENST00000535367 RAD54L2Q9Y4B4 1467 aa31.9■■■□□ 2.7
C12orf43-205ENST00000535367 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
C12orf43-205ENST00000535367 WRNQ14191 1432 aaPredicted RBP eCLIP31.84■■■□□ 2.69
C12orf43-205ENST00000535367 AQRO60306 1485 aaKnown RBP eCLIP31.79■■■□□ 2.682e-6■■■■■ 26.8
C12orf43-205ENST00000535367 TOP2BQ02880 1626 aa31.76■■■□□ 2.67
C12orf43-205ENST00000535367 BIVM-ERCC5R4GMW8 1640 aa31.76■■■□□ 2.67
C12orf43-205ENST00000535367 SYNJ1O43426 1573 aa31.74■■■□□ 2.67
C12orf43-205ENST00000535367 TDRD9Q8NDG6 1382 aaKnown RBP31.74■■■□□ 2.67
C12orf43-205ENST00000535367 WDR97A6NE52 1622 aa31.72■■■□□ 2.67
C12orf43-205ENST00000535367 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
C12orf43-205ENST00000535367 ABCA10Q8WWZ4 1543 aa31.63■■■□□ 2.65
C12orf43-205ENST00000535367 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
C12orf43-205ENST00000535367 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
C12orf43-205ENST00000535367 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
C12orf43-205ENST00000535367 PBRM1Q86U86 1689 aa31.51■■■□□ 2.64
C12orf43-205ENST00000535367 ABCA5Q8WWZ7 1642 aa31.51■■■□□ 2.63
C12orf43-205ENST00000535367 CHD1O14646 1710 aa31.51■■■□□ 2.63
C12orf43-205ENST00000535367 FBLN2P98095 1184 aa31.5■■■□□ 2.63
C12orf43-205ENST00000535367 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
C12orf43-205ENST00000535367 CHMP7Q8WUX9 453 aaPredicted RBP31.39■■■□□ 2.62
C12orf43-205ENST00000535367 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
C12orf43-205ENST00000535367 ERICH3Q5RHP9 1530 aa31.26■■■□□ 2.59
C12orf43-205ENST00000535367 ADAMTS12P58397 1594 aa31.23■■■□□ 2.59
C12orf43-205ENST00000535367 KIF27Q86VH2 1401 aa31.19■■■□□ 2.58
C12orf43-205ENST00000535367 FHAD1B1AJZ9 1412 aa31.18■■■□□ 2.58
C12orf43-205ENST00000535367 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
C12orf43-205ENST00000535367 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
C12orf43-205ENST00000535367 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
C12orf43-205ENST00000535367 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
C12orf43-205ENST00000535367 CLASP1Q7Z460 1538 aa31.11■■■□□ 2.57
C12orf43-205ENST00000535367 ARHGEF11O15085 1522 aa31.09■■■□□ 2.57
C12orf43-205ENST00000535367 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
C12orf43-205ENST00000535367 IGF1RP08069 1367 aa31.02■■■□□ 2.56
C12orf43-205ENST00000535367 CUL7Q14999 1698 aa31■■■□□ 2.55
C12orf43-205ENST00000535367 NUP160Q12769 1436 aa30.98■■■□□ 2.55
C12orf43-205ENST00000535367 CEP170Q5SW79 1584 aa30.97■■■□□ 2.55
C12orf43-205ENST00000535367 CARMIL1Q5VZK9 1371 aa30.87■■■□□ 2.53
C12orf43-205ENST00000535367 RUSC2Q8N2Y8 1516 aa30.84■■■□□ 2.53
C12orf43-205ENST00000535367 CYB5RLQ6IPT4 315 aa30.84■■■□□ 2.53
C12orf43-205ENST00000535367 ARAP1Q96P48 1450 aa30.82■■■□□ 2.53
C12orf43-205ENST00000535367 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
C12orf43-205ENST00000535367 KIAA0586Q9BVV6 1533 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms