RNA–Protein interactions for RNA: ENST00000535271.1

MMP17-205, Transcript of matrix metallopeptidase 17, humanhuman

TSL 2

Gene MMP17, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-205ENST00000535271 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
MMP17-205ENST00000535271 ABCC9O60706 1549 aa30.6■■■□□ 2.49
MMP17-205ENST00000535271 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
MMP17-205ENST00000535271 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
MMP17-205ENST00000535271 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
MMP17-205ENST00000535271 NACADO15069 1562 aa28.69■■■□□ 2.18
MMP17-205ENST00000535271 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
MMP17-205ENST00000535271 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
MMP17-205ENST00000535271 PABPN1Q86U42 306 aaKnown RBP eCLIP28.37■■■□□ 2.13
MMP17-205ENST00000535271 BICRAQ9NZM4 1560 aa28.18■■■□□ 2.1
MMP17-205ENST00000535271 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
MMP17-205ENST00000535271 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
MMP17-205ENST00000535271 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
MMP17-205ENST00000535271 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
MMP17-205ENST00000535271 CC2D2AQ9P2K1 1620 aa27.66■■■□□ 2.02
MMP17-205ENST00000535271 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
MMP17-205ENST00000535271 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
MMP17-205ENST00000535271 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
MMP17-205ENST00000535271 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
MMP17-205ENST00000535271 CUX2O14529 1486 aa26.49■■□□□ 1.83
MMP17-205ENST00000535271 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
MMP17-205ENST00000535271 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
MMP17-205ENST00000535271 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
MMP17-205ENST00000535271 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
MMP17-205ENST00000535271 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
MMP17-205ENST00000535271 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
MMP17-205ENST00000535271 NESP48681 1621 aa26.2■■□□□ 1.78
MMP17-205ENST00000535271 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
MMP17-205ENST00000535271 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
MMP17-205ENST00000535271 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
MMP17-205ENST00000535271 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
MMP17-205ENST00000535271 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
MMP17-205ENST00000535271 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
MMP17-205ENST00000535271 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
MMP17-205ENST00000535271 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
MMP17-205ENST00000535271 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
MMP17-205ENST00000535271 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
MMP17-205ENST00000535271 WIZO95785 1651 aa25.59■■□□□ 1.69
MMP17-205ENST00000535271 WDR62O43379 1518 aa25.58■■□□□ 1.68
MMP17-205ENST00000535271 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
MMP17-205ENST00000535271 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
MMP17-205ENST00000535271 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
MMP17-205ENST00000535271 CFTRP13569 1480 aa25.28■■□□□ 1.64
MMP17-205ENST00000535271 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
MMP17-205ENST00000535271 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
MMP17-205ENST00000535271 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
MMP17-205ENST00000535271 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
MMP17-205ENST00000535271 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
MMP17-205ENST00000535271 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
MMP17-205ENST00000535271 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
MMP17-205ENST00000535271 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
MMP17-205ENST00000535271 ZNF608Q9ULD9 1512 aaPredicted RBP24.94■■□□□ 1.58
MMP17-205ENST00000535271 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
MMP17-205ENST00000535271 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
MMP17-205ENST00000535271 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
MMP17-205ENST00000535271 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
MMP17-205ENST00000535271 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
MMP17-205ENST00000535271 CHD1O14646 1710 aa24.77■■□□□ 1.56
MMP17-205ENST00000535271 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
MMP17-205ENST00000535271 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
MMP17-205ENST00000535271 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
MMP17-205ENST00000535271 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
MMP17-205ENST00000535271 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
MMP17-205ENST00000535271 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
MMP17-205ENST00000535271 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
MMP17-205ENST00000535271 FBLN2P98095 1184 aa24.52■■□□□ 1.52
MMP17-205ENST00000535271 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
MMP17-205ENST00000535271 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
MMP17-205ENST00000535271 SOGA1O94964 1423 aa24.44■■□□□ 1.5
MMP17-205ENST00000535271 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
MMP17-205ENST00000535271 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
MMP17-205ENST00000535271 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
MMP17-205ENST00000535271 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
MMP17-205ENST00000535271 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
MMP17-205ENST00000535271 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
MMP17-205ENST00000535271 CUX1P39880 1505 aa24.33■■□□□ 1.49
MMP17-205ENST00000535271 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
MMP17-205ENST00000535271 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
MMP17-205ENST00000535271 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
MMP17-205ENST00000535271 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
MMP17-205ENST00000535271 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
MMP17-205ENST00000535271 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
MMP17-205ENST00000535271 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
MMP17-205ENST00000535271 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
MMP17-205ENST00000535271 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
MMP17-205ENST00000535271 ERCC6L2Q5T890 1561 aa24.02■■□□□ 1.44
MMP17-205ENST00000535271 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
MMP17-205ENST00000535271 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
MMP17-205ENST00000535271 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
MMP17-205ENST00000535271 CEP170Q5SW79 1584 aa23.95■■□□□ 1.43
MMP17-205ENST00000535271 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
MMP17-205ENST00000535271 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
MMP17-205ENST00000535271 NUP160Q12769 1436 aa23.9■■□□□ 1.42
MMP17-205ENST00000535271 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
MMP17-205ENST00000535271 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
MMP17-205ENST00000535271 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
MMP17-205ENST00000535271 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
MMP17-205ENST00000535271 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
MMP17-205ENST00000535271 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
MMP17-205ENST00000535271 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms