RNA–Protein interactions for RNA: ENST00000535269.1

KDM5A-203, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-203ENST00000535269 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
KDM5A-203ENST00000535269 ABCC9O60706 1549 aa18.72■□□□□ 0.59
KDM5A-203ENST00000535269 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
KDM5A-203ENST00000535269 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
KDM5A-203ENST00000535269 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
KDM5A-203ENST00000535269 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
KDM5A-203ENST00000535269 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
KDM5A-203ENST00000535269 NACADO15069 1562 aa17.36■□□□□ 0.37
KDM5A-203ENST00000535269 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
KDM5A-203ENST00000535269 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
KDM5A-203ENST00000535269 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
KDM5A-203ENST00000535269 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
KDM5A-203ENST00000535269 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
KDM5A-203ENST00000535269 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
KDM5A-203ENST00000535269 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
KDM5A-203ENST00000535269 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
KDM5A-203ENST00000535269 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
KDM5A-203ENST00000535269 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
KDM5A-203ENST00000535269 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
KDM5A-203ENST00000535269 CUX2O14529 1486 aa16.25■□□□□ 0.19
KDM5A-203ENST00000535269 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
KDM5A-203ENST00000535269 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
KDM5A-203ENST00000535269 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
KDM5A-203ENST00000535269 NESP48681 1621 aa15.94■□□□□ 0.14
KDM5A-203ENST00000535269 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
KDM5A-203ENST00000535269 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
KDM5A-203ENST00000535269 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
KDM5A-203ENST00000535269 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
KDM5A-203ENST00000535269 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
KDM5A-203ENST00000535269 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
KDM5A-203ENST00000535269 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
KDM5A-203ENST00000535269 PDS5BQ9NTI5 1447 aa15.7■□□□□ 0.1
KDM5A-203ENST00000535269 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
KDM5A-203ENST00000535269 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
KDM5A-203ENST00000535269 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
KDM5A-203ENST00000535269 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
KDM5A-203ENST00000535269 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
KDM5A-203ENST00000535269 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
KDM5A-203ENST00000535269 WDR62O43379 1518 aa15.52■□□□□ 0.07
KDM5A-203ENST00000535269 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
KDM5A-203ENST00000535269 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
KDM5A-203ENST00000535269 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
KDM5A-203ENST00000535269 WIZO95785 1651 aa15.33■□□□□ 0.04
KDM5A-203ENST00000535269 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
KDM5A-203ENST00000535269 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
KDM5A-203ENST00000535269 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
KDM5A-203ENST00000535269 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
KDM5A-203ENST00000535269 CFTRP13569 1480 aa15.26■□□□□ 0.03
KDM5A-203ENST00000535269 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
KDM5A-203ENST00000535269 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
KDM5A-203ENST00000535269 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
KDM5A-203ENST00000535269 IFT140Q96RY7 1462 aa15.15■□□□□ 0.02
KDM5A-203ENST00000535269 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
KDM5A-203ENST00000535269 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
KDM5A-203ENST00000535269 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
KDM5A-203ENST00000535269 FBLN2P98095 1184 aa15.09■□□□□ 0.01
KDM5A-203ENST00000535269 RSF1Q96T23 1441 aaPredicted RBP15.07■□□□□ 0
KDM5A-203ENST00000535269 PRDM2Q13029 1718 aa15.04■□□□□ -0
KDM5A-203ENST00000535269 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
KDM5A-203ENST00000535269 TOPBP1Q92547 1522 aa15.04■□□□□ -0
KDM5A-203ENST00000535269 ARAP1Q96P48 1450 aa15.02■□□□□ -0
KDM5A-203ENST00000535269 CHD1O14646 1710 aa15□□□□□ -0.01
KDM5A-203ENST00000535269 AQRO60306 1485 aaKnown RBP eCLIP14.99□□□□□ -0.01
KDM5A-203ENST00000535269 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
KDM5A-203ENST00000535269 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
KDM5A-203ENST00000535269 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
KDM5A-203ENST00000535269 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
KDM5A-203ENST00000535269 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
KDM5A-203ENST00000535269 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
KDM5A-203ENST00000535269 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
KDM5A-203ENST00000535269 SNAPC4Q5SXM2 1469 aa14.83□□□□□ -0.03
KDM5A-203ENST00000535269 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
KDM5A-203ENST00000535269 SOGA1O94964 1423 aa14.82□□□□□ -0.04
KDM5A-203ENST00000535269 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
KDM5A-203ENST00000535269 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
KDM5A-203ENST00000535269 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
KDM5A-203ENST00000535269 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
KDM5A-203ENST00000535269 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
KDM5A-203ENST00000535269 GRIN2BQ13224 1484 aa14.72□□□□□ -0.05
KDM5A-203ENST00000535269 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
KDM5A-203ENST00000535269 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
KDM5A-203ENST00000535269 CUX1P39880 1505 aa14.62□□□□□ -0.07
KDM5A-203ENST00000535269 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
KDM5A-203ENST00000535269 ERCC6L2Q5T890 1561 aa14.55□□□□□ -0.08
KDM5A-203ENST00000535269 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
KDM5A-203ENST00000535269 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
KDM5A-203ENST00000535269 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
KDM5A-203ENST00000535269 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
KDM5A-203ENST00000535269 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
KDM5A-203ENST00000535269 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
KDM5A-203ENST00000535269 FAM69CQ0P6D2 419 aa14.45□□□□□ -0.1
KDM5A-203ENST00000535269 NUP160Q12769 1436 aa14.45□□□□□ -0.1
KDM5A-203ENST00000535269 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
KDM5A-203ENST00000535269 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
KDM5A-203ENST00000535269 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
KDM5A-203ENST00000535269 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
KDM5A-203ENST00000535269 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
KDM5A-203ENST00000535269 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
KDM5A-203ENST00000535269 ABCC10Q5T3U5 1492 aa14.37□□□□□ -0.11
KDM5A-203ENST00000535269 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms