RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
MSRB3-205ENST00000535239 CCDC180Q9P1Z9 1646 aa33.67■■■□□ 2.98
MSRB3-205ENST00000535239 ABCC9O60706 1549 aa33.11■■■□□ 2.89
MSRB3-205ENST00000535239 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
MSRB3-205ENST00000535239 NACADO15069 1562 aa31.74■■■□□ 2.67
MSRB3-205ENST00000535239 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
MSRB3-205ENST00000535239 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
MSRB3-205ENST00000535239 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
MSRB3-205ENST00000535239 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
MSRB3-205ENST00000535239 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
MSRB3-205ENST00000535239 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
MSRB3-205ENST00000535239 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
MSRB3-205ENST00000535239 DNAJC5BQ9UF47 199 aa30.7■■■□□ 2.51
MSRB3-205ENST00000535239 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
MSRB3-205ENST00000535239 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
MSRB3-205ENST00000535239 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
MSRB3-205ENST00000535239 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
MSRB3-205ENST00000535239 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
MSRB3-205ENST00000535239 NCAPD3P42695 1498 aa29.32■■■□□ 2.28
MSRB3-205ENST00000535239 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
MSRB3-205ENST00000535239 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
MSRB3-205ENST00000535239 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
MSRB3-205ENST00000535239 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
MSRB3-205ENST00000535239 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
MSRB3-205ENST00000535239 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
MSRB3-205ENST00000535239 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
MSRB3-205ENST00000535239 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.22
MSRB3-205ENST00000535239 WIZO95785 1651 aa28.69■■■□□ 2.18
MSRB3-205ENST00000535239 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
MSRB3-205ENST00000535239 NESP48681 1621 aa28.58■■■□□ 2.17
MSRB3-205ENST00000535239 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
MSRB3-205ENST00000535239 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
MSRB3-205ENST00000535239 CUX2O14529 1486 aa28.44■■■□□ 2.14
MSRB3-205ENST00000535239 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
MSRB3-205ENST00000535239 TOP2AP11388 1531 aaKnown RBP28.41■■■□□ 2.14
MSRB3-205ENST00000535239 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
MSRB3-205ENST00000535239 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
MSRB3-205ENST00000535239 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
MSRB3-205ENST00000535239 CFTRP13569 1480 aa28.21■■■□□ 2.11
MSRB3-205ENST00000535239 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
MSRB3-205ENST00000535239 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
MSRB3-205ENST00000535239 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
MSRB3-205ENST00000535239 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
MSRB3-205ENST00000535239 WDR62O43379 1518 aa27.99■■■□□ 2.07
MSRB3-205ENST00000535239 PRDM2Q13029 1718 aa27.9■■■□□ 2.06
MSRB3-205ENST00000535239 DNAJC5Q9H3Z4 198 aa27.9■■■□□ 2.06
MSRB3-205ENST00000535239 URB2Q14146 1524 aaKnown RBP27.79■■■□□ 2.04
MSRB3-205ENST00000535239 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
MSRB3-205ENST00000535239 SUPT5HO00267 1087 aaKnown RBP27.61■■■□□ 2.01
MSRB3-205ENST00000535239 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
MSRB3-205ENST00000535239 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
MSRB3-205ENST00000535239 IFT140Q96RY7 1462 aa27.49■■□□□ 1.99
MSRB3-205ENST00000535239 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
MSRB3-205ENST00000535239 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
MSRB3-205ENST00000535239 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
MSRB3-205ENST00000535239 CUX1P39880 1505 aa27.26■■□□□ 1.96
MSRB3-205ENST00000535239 SOGA1O94964 1423 aa27.22■■□□□ 1.95
MSRB3-205ENST00000535239 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
MSRB3-205ENST00000535239 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
MSRB3-205ENST00000535239 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
MSRB3-205ENST00000535239 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
MSRB3-205ENST00000535239 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
MSRB3-205ENST00000535239 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
MSRB3-205ENST00000535239 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
MSRB3-205ENST00000535239 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
MSRB3-205ENST00000535239 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
MSRB3-205ENST00000535239 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
MSRB3-205ENST00000535239 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
MSRB3-205ENST00000535239 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
MSRB3-205ENST00000535239 MAGI1Q96QZ7 1491 aaPredicted RBP26.91■■□□□ 1.9
MSRB3-205ENST00000535239 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
MSRB3-205ENST00000535239 CHD1O14646 1710 aa26.9■■□□□ 1.9
MSRB3-205ENST00000535239 GAPVD1Q14C86 1478 aa26.89■■□□□ 1.9
MSRB3-205ENST00000535239 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
MSRB3-205ENST00000535239 ABCA5Q8WWZ7 1642 aa26.87■■□□□ 1.89
MSRB3-205ENST00000535239 FBLN2P98095 1184 aa26.83■■□□□ 1.89
MSRB3-205ENST00000535239 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
MSRB3-205ENST00000535239 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
MSRB3-205ENST00000535239 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
MSRB3-205ENST00000535239 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
MSRB3-205ENST00000535239 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
MSRB3-205ENST00000535239 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
MSRB3-205ENST00000535239 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
MSRB3-205ENST00000535239 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
MSRB3-205ENST00000535239 CLASP1Q7Z460 1538 aa26.67■■□□□ 1.86
MSRB3-205ENST00000535239 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
MSRB3-205ENST00000535239 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
MSRB3-205ENST00000535239 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
MSRB3-205ENST00000535239 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
MSRB3-205ENST00000535239 NUP160Q12769 1436 aa26.51■■□□□ 1.83
MSRB3-205ENST00000535239 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
MSRB3-205ENST00000535239 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
MSRB3-205ENST00000535239 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
MSRB3-205ENST00000535239 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
MSRB3-205ENST00000535239 IGF1RP08069 1367 aa26.43■■□□□ 1.82
MSRB3-205ENST00000535239 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
MSRB3-205ENST00000535239 CUL7Q14999 1698 aa26.31■■□□□ 1.8
MSRB3-205ENST00000535239 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
MSRB3-205ENST00000535239 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
MSRB3-205ENST00000535239 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms