RNA–Protein interactions for RNA: ENST00000535080.1

USP5-203, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-203ENST00000535080 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
USP5-203ENST00000535080 ABCC9O60706 1549 aa17.62■□□□□ 0.41
USP5-203ENST00000535080 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
USP5-203ENST00000535080 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
USP5-203ENST00000535080 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
USP5-203ENST00000535080 NACADO15069 1562 aa16.65■□□□□ 0.26
USP5-203ENST00000535080 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
USP5-203ENST00000535080 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP5-203ENST00000535080 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
USP5-203ENST00000535080 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
USP5-203ENST00000535080 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
USP5-203ENST00000535080 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
USP5-203ENST00000535080 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
USP5-203ENST00000535080 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
USP5-203ENST00000535080 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
USP5-203ENST00000535080 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
USP5-203ENST00000535080 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
USP5-203ENST00000535080 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
USP5-203ENST00000535080 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
USP5-203ENST00000535080 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
USP5-203ENST00000535080 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
USP5-203ENST00000535080 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
USP5-203ENST00000535080 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
USP5-203ENST00000535080 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
USP5-203ENST00000535080 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
USP5-203ENST00000535080 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
USP5-203ENST00000535080 CUX2O14529 1486 aa15.16■□□□□ 0.02
USP5-203ENST00000535080 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
USP5-203ENST00000535080 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
USP5-203ENST00000535080 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
USP5-203ENST00000535080 NESP48681 1621 aa15.12■□□□□ 0.01
USP5-203ENST00000535080 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
USP5-203ENST00000535080 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
USP5-203ENST00000535080 WIZO95785 1651 aa14.94□□□□□ -0.02
USP5-203ENST00000535080 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
USP5-203ENST00000535080 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
USP5-203ENST00000535080 KIF21AQ7Z4S6 1674 aa14.9□□□□□ -0.02
USP5-203ENST00000535080 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
USP5-203ENST00000535080 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
USP5-203ENST00000535080 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
USP5-203ENST00000535080 WDR62O43379 1518 aa14.76□□□□□ -0.05
USP5-203ENST00000535080 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
USP5-203ENST00000535080 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
USP5-203ENST00000535080 CFTRP13569 1480 aa14.74□□□□□ -0.05
USP5-203ENST00000535080 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
USP5-203ENST00000535080 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
USP5-203ENST00000535080 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
USP5-203ENST00000535080 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
USP5-203ENST00000535080 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
USP5-203ENST00000535080 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
USP5-203ENST00000535080 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
USP5-203ENST00000535080 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
USP5-203ENST00000535080 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
USP5-203ENST00000535080 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
USP5-203ENST00000535080 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
USP5-203ENST00000535080 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP5-203ENST00000535080 TARBP1Q13395 1621 aaKnown RBP14.31□□□□□ -0.12
USP5-203ENST00000535080 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
USP5-203ENST00000535080 FBLN2P98095 1184 aa14.28□□□□□ -0.12
USP5-203ENST00000535080 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
USP5-203ENST00000535080 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
USP5-203ENST00000535080 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
USP5-203ENST00000535080 SOGA1O94964 1423 aa14.27□□□□□ -0.12
USP5-203ENST00000535080 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
USP5-203ENST00000535080 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
USP5-203ENST00000535080 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
USP5-203ENST00000535080 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
USP5-203ENST00000535080 CHD1O14646 1710 aa14.23□□□□□ -0.13
USP5-203ENST00000535080 FGD5Q6ZNL6 1462 aa14.23□□□□□ -0.13
USP5-203ENST00000535080 CUX1P39880 1505 aa14.2□□□□□ -0.14
USP5-203ENST00000535080 CYB5RLQ6IPT4 315 aa14.19□□□□□ -0.14
USP5-203ENST00000535080 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
USP5-203ENST00000535080 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
USP5-203ENST00000535080 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
USP5-203ENST00000535080 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
USP5-203ENST00000535080 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
USP5-203ENST00000535080 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
USP5-203ENST00000535080 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
USP5-203ENST00000535080 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
USP5-203ENST00000535080 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
USP5-203ENST00000535080 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
USP5-203ENST00000535080 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
USP5-203ENST00000535080 PBRM1Q86U86 1689 aa14.05□□□□□ -0.16
USP5-203ENST00000535080 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
USP5-203ENST00000535080 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
USP5-203ENST00000535080 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
USP5-203ENST00000535080 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
USP5-203ENST00000535080 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
USP5-203ENST00000535080 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
USP5-203ENST00000535080 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
USP5-203ENST00000535080 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
USP5-203ENST00000535080 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
USP5-203ENST00000535080 NUP160Q12769 1436 aa13.89□□□□□ -0.19
USP5-203ENST00000535080 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
USP5-203ENST00000535080 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
USP5-203ENST00000535080 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
USP5-203ENST00000535080 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
USP5-203ENST00000535080 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
USP5-203ENST00000535080 KIF27Q86VH2 1401 aa13.75□□□□□ -0.21
USP5-203ENST00000535080 IGF1RP08069 1367 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms