RNA–Protein interactions for RNA: ENST00000534958.5

PACRG-204, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-204ENST00000534958 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
PACRG-204ENST00000534958 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
PACRG-204ENST00000534958 ABCC9O60706 1549 aa21.08■□□□□ 0.96
PACRG-204ENST00000534958 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
PACRG-204ENST00000534958 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
PACRG-204ENST00000534958 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
PACRG-204ENST00000534958 NACADO15069 1562 aa20.62■□□□□ 0.89
PACRG-204ENST00000534958 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
PACRG-204ENST00000534958 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
PACRG-204ENST00000534958 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
PACRG-204ENST00000534958 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
PACRG-204ENST00000534958 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
PACRG-204ENST00000534958 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
PACRG-204ENST00000534958 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
PACRG-204ENST00000534958 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
PACRG-204ENST00000534958 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
PACRG-204ENST00000534958 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
PACRG-204ENST00000534958 SMARCA4P51532 1647 aa19.26■□□□□ 0.67
PACRG-204ENST00000534958 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
PACRG-204ENST00000534958 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
PACRG-204ENST00000534958 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
PACRG-204ENST00000534958 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
PACRG-204ENST00000534958 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
PACRG-204ENST00000534958 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
PACRG-204ENST00000534958 WIZO95785 1651 aa18.98■□□□□ 0.63
PACRG-204ENST00000534958 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
PACRG-204ENST00000534958 HMGXB3Q12766 1538 aa18.96■□□□□ 0.63
PACRG-204ENST00000534958 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
PACRG-204ENST00000534958 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
PACRG-204ENST00000534958 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
PACRG-204ENST00000534958 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
PACRG-204ENST00000534958 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
PACRG-204ENST00000534958 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
PACRG-204ENST00000534958 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
PACRG-204ENST00000534958 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
PACRG-204ENST00000534958 CFTRP13569 1480 aa18.41■□□□□ 0.54
PACRG-204ENST00000534958 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
PACRG-204ENST00000534958 NESP48681 1621 aa18.31■□□□□ 0.52
PACRG-204ENST00000534958 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
PACRG-204ENST00000534958 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
PACRG-204ENST00000534958 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
PACRG-204ENST00000534958 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
PACRG-204ENST00000534958 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
PACRG-204ENST00000534958 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
PACRG-204ENST00000534958 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
PACRG-204ENST00000534958 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
PACRG-204ENST00000534958 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
PACRG-204ENST00000534958 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
PACRG-204ENST00000534958 WDR62O43379 1518 aa18.01■□□□□ 0.47
PACRG-204ENST00000534958 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
PACRG-204ENST00000534958 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
PACRG-204ENST00000534958 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
PACRG-204ENST00000534958 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
PACRG-204ENST00000534958 CUX1P39880 1505 aa17.96■□□□□ 0.47
PACRG-204ENST00000534958 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
PACRG-204ENST00000534958 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
PACRG-204ENST00000534958 CUX2O14529 1486 aa17.88■□□□□ 0.45
PACRG-204ENST00000534958 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
PACRG-204ENST00000534958 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
PACRG-204ENST00000534958 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
PACRG-204ENST00000534958 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
PACRG-204ENST00000534958 SOGA1O94964 1423 aa17.78■□□□□ 0.44
PACRG-204ENST00000534958 WDR97A6NE52 1622 aa17.75■□□□□ 0.43
PACRG-204ENST00000534958 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
PACRG-204ENST00000534958 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
PACRG-204ENST00000534958 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
PACRG-204ENST00000534958 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
PACRG-204ENST00000534958 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
PACRG-204ENST00000534958 EEA1Q15075 1411 aa17.63■□□□□ 0.41
PACRG-204ENST00000534958 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
PACRG-204ENST00000534958 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
PACRG-204ENST00000534958 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
PACRG-204ENST00000534958 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
PACRG-204ENST00000534958 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
PACRG-204ENST00000534958 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
PACRG-204ENST00000534958 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
PACRG-204ENST00000534958 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
PACRG-204ENST00000534958 CUL7Q14999 1698 aa17.51■□□□□ 0.39
PACRG-204ENST00000534958 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
PACRG-204ENST00000534958 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
PACRG-204ENST00000534958 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
PACRG-204ENST00000534958 IGF1RP08069 1367 aa17.45■□□□□ 0.38
PACRG-204ENST00000534958 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
PACRG-204ENST00000534958 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
PACRG-204ENST00000534958 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
PACRG-204ENST00000534958 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
PACRG-204ENST00000534958 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
PACRG-204ENST00000534958 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
PACRG-204ENST00000534958 KIF21BO75037 1637 aa17.38■□□□□ 0.37
PACRG-204ENST00000534958 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
PACRG-204ENST00000534958 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
PACRG-204ENST00000534958 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
PACRG-204ENST00000534958 CHD1O14646 1710 aa17.33■□□□□ 0.37
PACRG-204ENST00000534958 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
PACRG-204ENST00000534958 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
PACRG-204ENST00000534958 FBLN2P98095 1184 aa17.29■□□□□ 0.36
PACRG-204ENST00000534958 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
PACRG-204ENST00000534958 NUP160Q12769 1436 aa17.21■□□□□ 0.35
PACRG-204ENST00000534958 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
PACRG-204ENST00000534958 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms