RNA–Protein interactions for RNA: ENST00000534829.5

SSPN-203, Transcript of sarcospan, humanhuman

TSL 3

Gene SSPN, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-203ENST00000534829 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
SSPN-203ENST00000534829 ABCC9O60706 1549 aa24.33■■□□□ 1.49
SSPN-203ENST00000534829 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
SSPN-203ENST00000534829 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
SSPN-203ENST00000534829 RB1CC1Q8TDY2 1594 aa22.69■■□□□ 1.22
SSPN-203ENST00000534829 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
SSPN-203ENST00000534829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
SSPN-203ENST00000534829 NACADO15069 1562 aa22.29■■□□□ 1.16
SSPN-203ENST00000534829 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
SSPN-203ENST00000534829 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
SSPN-203ENST00000534829 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
SSPN-203ENST00000534829 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
SSPN-203ENST00000534829 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
SSPN-203ENST00000534829 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
SSPN-203ENST00000534829 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
SSPN-203ENST00000534829 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
SSPN-203ENST00000534829 CUX2O14529 1486 aa21.37■■□□□ 1.01
SSPN-203ENST00000534829 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
SSPN-203ENST00000534829 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
SSPN-203ENST00000534829 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
SSPN-203ENST00000534829 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.96
SSPN-203ENST00000534829 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
SSPN-203ENST00000534829 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
SSPN-203ENST00000534829 NESP48681 1621 aa20.64■□□□□ 0.9
SSPN-203ENST00000534829 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
SSPN-203ENST00000534829 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
SSPN-203ENST00000534829 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
SSPN-203ENST00000534829 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
SSPN-203ENST00000534829 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
SSPN-203ENST00000534829 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
SSPN-203ENST00000534829 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
SSPN-203ENST00000534829 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
SSPN-203ENST00000534829 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
SSPN-203ENST00000534829 SMARCA4P51532 1647 aa20.14■□□□□ 0.81
SSPN-203ENST00000534829 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
SSPN-203ENST00000534829 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
SSPN-203ENST00000534829 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
SSPN-203ENST00000534829 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
SSPN-203ENST00000534829 WDR62O43379 1518 aa20.11■□□□□ 0.81
SSPN-203ENST00000534829 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
SSPN-203ENST00000534829 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
SSPN-203ENST00000534829 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
SSPN-203ENST00000534829 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
SSPN-203ENST00000534829 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
SSPN-203ENST00000534829 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
SSPN-203ENST00000534829 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
SSPN-203ENST00000534829 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
SSPN-203ENST00000534829 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
SSPN-203ENST00000534829 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
SSPN-203ENST00000534829 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
SSPN-203ENST00000534829 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
SSPN-203ENST00000534829 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
SSPN-203ENST00000534829 CFTRP13569 1480 aa19.49■□□□□ 0.71
SSPN-203ENST00000534829 CHD1O14646 1710 aa19.46■□□□□ 0.71
SSPN-203ENST00000534829 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
SSPN-203ENST00000534829 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
SSPN-203ENST00000534829 ILDR1Q86SU0 546 aaPredicted RBP19.41■□□□□ 0.7
SSPN-203ENST00000534829 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
SSPN-203ENST00000534829 WIZO95785 1651 aa19.38■□□□□ 0.69
SSPN-203ENST00000534829 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
SSPN-203ENST00000534829 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
SSPN-203ENST00000534829 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
SSPN-203ENST00000534829 TOPBP1Q92547 1522 aa19.22■□□□□ 0.67
SSPN-203ENST00000534829 FBLN2P98095 1184 aa19.22■□□□□ 0.67
SSPN-203ENST00000534829 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
SSPN-203ENST00000534829 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
SSPN-203ENST00000534829 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
SSPN-203ENST00000534829 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
SSPN-203ENST00000534829 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
SSPN-203ENST00000534829 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
SSPN-203ENST00000534829 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
SSPN-203ENST00000534829 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
SSPN-203ENST00000534829 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
SSPN-203ENST00000534829 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
SSPN-203ENST00000534829 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
SSPN-203ENST00000534829 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
SSPN-203ENST00000534829 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
SSPN-203ENST00000534829 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SSPN-203ENST00000534829 ERCC6L2Q5T890 1561 aa18.86■□□□□ 0.61
SSPN-203ENST00000534829 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
SSPN-203ENST00000534829 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
SSPN-203ENST00000534829 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
SSPN-203ENST00000534829 SOGA1O94964 1423 aa18.81■□□□□ 0.6
SSPN-203ENST00000534829 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
SSPN-203ENST00000534829 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
SSPN-203ENST00000534829 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
SSPN-203ENST00000534829 KDM6BO15054 1643 aa18.69■□□□□ 0.58
SSPN-203ENST00000534829 PBRM1Q86U86 1689 aa18.68■□□□□ 0.58
SSPN-203ENST00000534829 HECW2Q9P2P5 1572 aa18.67■□□□□ 0.58
SSPN-203ENST00000534829 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
SSPN-203ENST00000534829 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
SSPN-203ENST00000534829 DIP2BQ9P265 1576 aa18.62■□□□□ 0.57
SSPN-203ENST00000534829 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
SSPN-203ENST00000534829 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
SSPN-203ENST00000534829 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
SSPN-203ENST00000534829 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
SSPN-203ENST00000534829 NUP160Q12769 1436 aa18.56■□□□□ 0.56
SSPN-203ENST00000534829 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
SSPN-203ENST00000534829 CUX1P39880 1505 aa18.55■□□□□ 0.56
SSPN-203ENST00000534829 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms