RNA–Protein interactions for RNA: ENST00000534803.1

PAMR1-204, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 3

Gene PAMR1, Length 952 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-204ENST00000534803 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
PAMR1-204ENST00000534803 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
PAMR1-204ENST00000534803 ABCC9O60706 1549 aa26.07■■□□□ 1.76
PAMR1-204ENST00000534803 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
PAMR1-204ENST00000534803 NACADO15069 1562 aa24.75■■□□□ 1.55
PAMR1-204ENST00000534803 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
PAMR1-204ENST00000534803 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
PAMR1-204ENST00000534803 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
PAMR1-204ENST00000534803 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
PAMR1-204ENST00000534803 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
PAMR1-204ENST00000534803 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
PAMR1-204ENST00000534803 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
PAMR1-204ENST00000534803 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
PAMR1-204ENST00000534803 SCRIBQ14160 1630 aa24■■□□□ 1.43
PAMR1-204ENST00000534803 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
PAMR1-204ENST00000534803 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
PAMR1-204ENST00000534803 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
PAMR1-204ENST00000534803 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
PAMR1-204ENST00000534803 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
PAMR1-204ENST00000534803 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
PAMR1-204ENST00000534803 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
PAMR1-204ENST00000534803 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
PAMR1-204ENST00000534803 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
PAMR1-204ENST00000534803 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
PAMR1-204ENST00000534803 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
PAMR1-204ENST00000534803 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
PAMR1-204ENST00000534803 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
PAMR1-204ENST00000534803 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
PAMR1-204ENST00000534803 NESP48681 1621 aa22.44■■□□□ 1.18
PAMR1-204ENST00000534803 WIZO95785 1651 aa22.39■■□□□ 1.17
PAMR1-204ENST00000534803 CUX2O14529 1486 aa22.36■■□□□ 1.17
PAMR1-204ENST00000534803 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.17
PAMR1-204ENST00000534803 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
PAMR1-204ENST00000534803 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
PAMR1-204ENST00000534803 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
PAMR1-204ENST00000534803 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
PAMR1-204ENST00000534803 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
PAMR1-204ENST00000534803 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
PAMR1-204ENST00000534803 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
PAMR1-204ENST00000534803 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
PAMR1-204ENST00000534803 CFTRP13569 1480 aa21.96■■□□□ 1.11
PAMR1-204ENST00000534803 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
PAMR1-204ENST00000534803 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
PAMR1-204ENST00000534803 WDR62O43379 1518 aa21.92■■□□□ 1.1
PAMR1-204ENST00000534803 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
PAMR1-204ENST00000534803 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
PAMR1-204ENST00000534803 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
PAMR1-204ENST00000534803 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
PAMR1-204ENST00000534803 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
PAMR1-204ENST00000534803 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
PAMR1-204ENST00000534803 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
PAMR1-204ENST00000534803 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
PAMR1-204ENST00000534803 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
PAMR1-204ENST00000534803 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
PAMR1-204ENST00000534803 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
PAMR1-204ENST00000534803 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
PAMR1-204ENST00000534803 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
PAMR1-204ENST00000534803 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
PAMR1-204ENST00000534803 CUX1P39880 1505 aa21.28■■□□□ 1
PAMR1-204ENST00000534803 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
PAMR1-204ENST00000534803 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
PAMR1-204ENST00000534803 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
PAMR1-204ENST00000534803 SOGA1O94964 1423 aa21.22■□□□□ 0.99
PAMR1-204ENST00000534803 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
PAMR1-204ENST00000534803 CHD1O14646 1710 aa21.13■□□□□ 0.97
PAMR1-204ENST00000534803 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
PAMR1-204ENST00000534803 FBLN2P98095 1184 aa21.11■□□□□ 0.97
PAMR1-204ENST00000534803 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
PAMR1-204ENST00000534803 RIMBP3CA6NJZ7 1639 aa21.05■□□□□ 0.96
PAMR1-204ENST00000534803 RIMBP3BA6NNM3 1639 aa21.05■□□□□ 0.96
PAMR1-204ENST00000534803 RIMBP3Q9UFD9 1639 aa21.05■□□□□ 0.96
PAMR1-204ENST00000534803 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
PAMR1-204ENST00000534803 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
PAMR1-204ENST00000534803 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
PAMR1-204ENST00000534803 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
PAMR1-204ENST00000534803 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
PAMR1-204ENST00000534803 SYNJ1O43426 1573 aa21■□□□□ 0.95
PAMR1-204ENST00000534803 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
PAMR1-204ENST00000534803 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
PAMR1-204ENST00000534803 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
PAMR1-204ENST00000534803 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
PAMR1-204ENST00000534803 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
PAMR1-204ENST00000534803 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
PAMR1-204ENST00000534803 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
PAMR1-204ENST00000534803 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
PAMR1-204ENST00000534803 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
PAMR1-204ENST00000534803 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
PAMR1-204ENST00000534803 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
PAMR1-204ENST00000534803 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
PAMR1-204ENST00000534803 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
PAMR1-204ENST00000534803 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
PAMR1-204ENST00000534803 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
PAMR1-204ENST00000534803 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
PAMR1-204ENST00000534803 NUP160Q12769 1436 aa20.69■□□□□ 0.9
PAMR1-204ENST00000534803 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
PAMR1-204ENST00000534803 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
PAMR1-204ENST00000534803 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
PAMR1-204ENST00000534803 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
PAMR1-204ENST00000534803 CUL7Q14999 1698 aa20.52■□□□□ 0.88
PAMR1-204ENST00000534803 IGF1RP08069 1367 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms