RNA–Protein interactions for RNA: ENST00000534798.5

XRRA1-220, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 4

Gene XRRA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-220ENST00000534798 NISCHQ9Y2I1 1504 aa42.85■■■■■ 4.45
XRRA1-220ENST00000534798 CCDC180Q9P1Z9 1646 aa38.31■■■■□ 3.72
XRRA1-220ENST00000534798 ABCC9O60706 1549 aa37.38■■■■□ 3.57
XRRA1-220ENST00000534798 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
XRRA1-220ENST00000534798 NACADO15069 1562 aa36.05■■■■□ 3.36
XRRA1-220ENST00000534798 MYO15BQ96JP2 1530 aa35.88■■■■□ 3.33
XRRA1-220ENST00000534798 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
XRRA1-220ENST00000534798 DCAF8L2P0C7V8 631 aa35.62■■■■□ 3.29
XRRA1-220ENST00000534798 DCAF1Q9Y4B6 1507 aa35.61■■■■□ 3.29
XRRA1-220ENST00000534798 UNC13AQ9UPW8 1703 aa35.13■■■■□ 3.21
XRRA1-220ENST00000534798 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
XRRA1-220ENST00000534798 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
XRRA1-220ENST00000534798 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
XRRA1-220ENST00000534798 SCRIBQ14160 1630 aa34.7■■■■□ 3.15
XRRA1-220ENST00000534798 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
XRRA1-220ENST00000534798 EIF4G1Q04637 1599 aaKnown RBP34.02■■■■□ 3.04
XRRA1-220ENST00000534798 CC2D2AQ9P2K1 1620 aa33.89■■■■□ 3.02
XRRA1-220ENST00000534798 CECR2Q9BXF3 1484 aa33.7■■■□□ 2.99
XRRA1-220ENST00000534798 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
XRRA1-220ENST00000534798 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
XRRA1-220ENST00000534798 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
XRRA1-220ENST00000534798 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
XRRA1-220ENST00000534798 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
XRRA1-220ENST00000534798 HMGXB3Q12766 1538 aa33.08■■■□□ 2.89
XRRA1-220ENST00000534798 PEG3Q9GZU2 1588 aa33.06■■■□□ 2.88
XRRA1-220ENST00000534798 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
XRRA1-220ENST00000534798 BAZ1BQ9UIG0 1483 aaKnown RBP32.87■■■□□ 2.85
XRRA1-220ENST00000534798 WIZO95785 1651 aa32.53■■■□□ 2.8
XRRA1-220ENST00000534798 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
XRRA1-220ENST00000534798 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
XRRA1-220ENST00000534798 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
XRRA1-220ENST00000534798 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
XRRA1-220ENST00000534798 NESP48681 1621 aa32.26■■■□□ 2.75
XRRA1-220ENST00000534798 CUX2O14529 1486 aa32.2■■■□□ 2.75
XRRA1-220ENST00000534798 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
XRRA1-220ENST00000534798 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
XRRA1-220ENST00000534798 CFTRP13569 1480 aa31.98■■■□□ 2.71
XRRA1-220ENST00000534798 THOC2Q8NI27 1593 aaKnown RBP31.96■■■□□ 2.71
XRRA1-220ENST00000534798 KIF21AQ7Z4S6 1674 aa31.95■■■□□ 2.71
XRRA1-220ENST00000534798 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
XRRA1-220ENST00000534798 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
XRRA1-220ENST00000534798 MRC2Q9UBG0 1479 aa31.81■■■□□ 2.68
XRRA1-220ENST00000534798 FANCD2Q9BXW9 1451 aa31.8■■■□□ 2.68
XRRA1-220ENST00000534798 PRDM2Q13029 1718 aa31.79■■■□□ 2.68
XRRA1-220ENST00000534798 WDR62O43379 1518 aa31.72■■■□□ 2.67
XRRA1-220ENST00000534798 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
XRRA1-220ENST00000534798 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
XRRA1-220ENST00000534798 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
XRRA1-220ENST00000534798 DNAJC5Q9H3Z4 198 aa31.28■■■□□ 2.6
XRRA1-220ENST00000534798 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
XRRA1-220ENST00000534798 TOPBP1Q92547 1522 aa31.26■■■□□ 2.59
XRRA1-220ENST00000534798 IFT140Q96RY7 1462 aa31.19■■■□□ 2.58
XRRA1-220ENST00000534798 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
XRRA1-220ENST00000534798 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
XRRA1-220ENST00000534798 CUX1P39880 1505 aa30.92■■■□□ 2.54
XRRA1-220ENST00000534798 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
XRRA1-220ENST00000534798 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
XRRA1-220ENST00000534798 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
XRRA1-220ENST00000534798 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
XRRA1-220ENST00000534798 SOGA1O94964 1423 aa30.84■■■□□ 2.53
XRRA1-220ENST00000534798 RAD54L2Q9Y4B4 1467 aa30.73■■■□□ 2.51
XRRA1-220ENST00000534798 OSCARQ8IYS5 282 aa30.72■■■□□ 2.51
XRRA1-220ENST00000534798 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.51
XRRA1-220ENST00000534798 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
XRRA1-220ENST00000534798 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
XRRA1-220ENST00000534798 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
XRRA1-220ENST00000534798 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
XRRA1-220ENST00000534798 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
XRRA1-220ENST00000534798 GRIN2BQ13224 1484 aa30.57■■■□□ 2.48
XRRA1-220ENST00000534798 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
XRRA1-220ENST00000534798 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
XRRA1-220ENST00000534798 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.48
XRRA1-220ENST00000534798 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.47
XRRA1-220ENST00000534798 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
XRRA1-220ENST00000534798 CHD1O14646 1710 aa30.47■■■□□ 2.47
XRRA1-220ENST00000534798 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
XRRA1-220ENST00000534798 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
XRRA1-220ENST00000534798 FBLN2P98095 1184 aa30.33■■■□□ 2.45
XRRA1-220ENST00000534798 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
XRRA1-220ENST00000534798 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
XRRA1-220ENST00000534798 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
XRRA1-220ENST00000534798 ARHGEF11O15085 1522 aa30.21■■■□□ 2.43
XRRA1-220ENST00000534798 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
XRRA1-220ENST00000534798 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
XRRA1-220ENST00000534798 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
XRRA1-220ENST00000534798 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
XRRA1-220ENST00000534798 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
XRRA1-220ENST00000534798 GRIN2AQ12879 1464 aa30.15■■■□□ 2.42
XRRA1-220ENST00000534798 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
XRRA1-220ENST00000534798 NUP160Q12769 1436 aa30.05■■■□□ 2.4
XRRA1-220ENST00000534798 CUL7Q14999 1698 aa30.01■■■□□ 2.4
XRRA1-220ENST00000534798 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
XRRA1-220ENST00000534798 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
XRRA1-220ENST00000534798 IGF1RP08069 1367 aa29.93■■■□□ 2.38
XRRA1-220ENST00000534798 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
XRRA1-220ENST00000534798 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
XRRA1-220ENST00000534798 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
XRRA1-220ENST00000534798 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
XRRA1-220ENST00000534798 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
XRRA1-220ENST00000534798 KIAA0586Q9BVV6 1533 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms